Sphingobium sp. TKS: K426_16225
Help
Entry
K426_16225 CDS
T04965
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00061
Fatty acid biosynthesis
spht00071
Fatty acid degradation
spht01100
Metabolic pathways
spht01212
Fatty acid metabolism
spht02024
Quorum sensing
spht04146
Peroxisome
Module
spht_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K426_16225
00071 Fatty acid degradation
K426_16225
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K426_16225
09145 Cellular community - prokaryotes
02024 Quorum sensing
K426_16225
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spht01004
]
K426_16225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spht04147
]
K426_16225
Enzymes [BR:
spht01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K426_16225
Lipid biosynthesis proteins [BR:
spht01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K426_16225
Exosome [BR:
spht04147
]
Exosomal proteins
Exosomal proteins of breast milk
K426_16225
Exosomal proteins of breast cancer cells
K426_16225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMK24177
UniProt:
A0A126RPY0
LinkDB
All DBs
Position
1:3279488..3281179
Genome browser
AA seq
563 aa
AA seq
DB search
MGEIVERDNDMDFGRFGLKVPTIRPKIPFGSQTIAGVLDHALQDRPDHEALVDRNGRYTY
AELEETVNAACRALTGFGVRAGDRIAATSSNSADLIIAFLASQRLGAVWVGMNRVLAPRE
KLYLLQDCEASLLLIDEESLSGLVPSLKDSDFKPRIVLLNGGSTEDEWREAVREASGAPR
PDVQIDPHAPALISYTSGTTGQPKGAVHSQHNVAVVAAAWVSRQDWDVGLRRGCAQAFTI
NNIMIRAGVLALAGGGTLVCMDRTDPEGVADWVENESIEVLFAVPTMLHDLLMDPRVKDR
RLASLVRPLSGGASLPDNVRRAFKDRFGSEIQFVYGLTEAPTSVSQTDPEEPFVPGSSGR
ALPHLEIGILDQDQNPVPTGGEGEVAIRATQTGPWAGVYTPLLGYWRRPDATAQVLKRGW
LLTGDVGRLDDDGRLYILDRRNDVIIRGGANIYPAELERALEEHPDVAAVAVVGLPNERL
GQVVAAVLQATGEDLDLPALDAWLKTQLAAYKTPKYYYLTEKMPRNAMNKIVKPTLRDKI
SSGELRLAHESSRRKIAGEQASG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggagagatcgtggaacgcgacaatgacatggatttcgggcggttcggcctcaaggtt
ccgaccatccgtccaaagatccccttcggctcgcagacgattgctggcgtgctagaccat
gcgctgcaagaccgaccagaccacgaagcgctggtcgaccggaacggccggtacacttac
gccgagctggaggagacggtgaacgcggcctgtcgggcattgaccgggttcggcgttcgg
gccggtgaccggatcgccgcgacctcatctaacagcgccgacctcataatcgcgttcctc
gcctcccagcgcctcggtgccgtctgggtcggcatgaaccgcgtgctggccccgcgcgag
aagctctatctgcttcaggactgcgaggcatccctcctccttatcgacgaggaaagcctg
agcggattggttccctccctcaaagactcagacttcaagccacgcatcgtactgctcaac
ggcggttcgacggaggacgaatggcgggaagcagtgcgtgaagcctccggggcgccaagg
ccggacgtgcagatcgatccgcatgctcctgcgcttatctcctatacgagcggtacgacc
ggccagccgaagggcgccgtccatagccagcacaacgtggccgtcgtcgccgcagcctgg
gtctcccgccaggactgggacgtcggcctccgccgcggctgcgcccaggcgttcacgatc
aacaacatcatgatccgcgcgggtgtcctggcgctggccgggggcggaaccctcgtctgc
atggaccgtaccgatccggaaggagtggcggactgggtcgagaacgagagcattgaggtg
ctcttcgcggtgcccacgatgctgcatgacctactgatggacccgagggtcaaagatcgg
cgtcttgcctccctcgtccgcccgctaagcggcggagcaagcctgcccgacaatgtgcgg
cgggcgttcaaggatcggttcggttcagagatccagttcgtctacgggctgaccgaggcg
cccacatccgtgtcgcagaccgaccccgaagaacctttcgttccgggatcgagcggccgc
gccctccctcacctcgagatcgggatcctcgaccaagaccagaaccccgtccctaccggt
ggagaaggggaagtcgcgatccgcgcgacgcagaccggtccctgggccggggtctacacg
cccctcctggggtactggcggcgtcccgacgcgacggcgcaagttctgaagcgcggctgg
ctgctaacaggggacgtgggacggctggacgacgatggacggctgtacatcctcgaccgg
cgcaacgacgtcatcatccgcggaggcgcgaacatctacccggcggagctcgagcgagcg
ttagaggagcatccggacgtcgccgcagtcgcggtcgttggacttccgaacgagcgactg
gggcaagtcgttgcggcggttctgcaagcgaccggcgaggatctggacctgccggcgctt
gacgcctggctgaagacgcagctggccgcctacaaaactcccaaatattattatctcacg
gagaagatgcccagaaacgcgatgaacaagatcgtcaagcccaccctccgagataagatc
tcaagcggggagctgcgtctagcacacgagtccagccgccgaaaaattgctggcgagcag
gcgtccggctga
DBGET
integrated database retrieval system
