Sphingobium sp. TKS: K426_17890
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Entry
K426_17890 CDS
T04965
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spht03032
]
K426_17890
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_17890
Enzymes [BR:
spht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K426_17890
DNA replication proteins [BR:
spht03032
]
Prokaryotic type
DNA Topoisomerases
K426_17890
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K426_17890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AMK24508
UniProt:
A0A126RQP4
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All DBs
Position
1:3626702..3627709
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AA seq
335 aa
AA seq
DB search
MPPKPIVHANDSLPGITRRTLKRGWAYFDASGARITDREEIDRLNAIAMPPAYRDCWFCS
TPNGHIQATGYDDRGRKQYRYHTDFRAAREAEKYAGCAAFGHALPKLRARIEADLSKRGL
RKERTLAAVVRLLDLAKVRIGNEQYAAANKSFGATTLRRRHVDLRGQALRLRYRAKSGRE
HELTVTDRRLARFARAVQDLPGQHLFQYLDEEGLARPITSSDVNAYIAQAMGGDFTAKHF
RTWGASVIAFEVLAAESLSLKQMIAPVAEALGNTPAISRKSYIHPALIELCRNGQDEWRE
GLRLPRATRYLSRYERGLIALLESLDTVSALPLAA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaagcccatcgtccacgccaatgacagcctgcccggcatcacgcgccggacc
ctgaaaagaggatgggcctatttcgacgccagcggcgcgcgcatcaccgaccgggaagag
atcgaccggctgaacgccatcgccatgccgcccgcctatcgcgattgctggttctgctcc
acgcccaatggccatatccaggcgaccggctatgatgatcggggccgcaagcaatatcgc
tatcacaccgatttccgcgctgcgcgggaggcggagaaatatgccggatgcgccgccttc
ggccatgccctgccgaaactgcgcgcccggatcgaggccgatctctccaaaaggggtctg
cgcaaggaaaggacgctggccgccgtcgtgcgcctgctcgatctggccaaggtccgcatc
ggcaatgagcaatatgccgccgcgaacaagagcttcggcgcaaccacgctacgccgccgc
catgtcgacctgcgcggtcaggcgctgcgcctgcgctaccgcgccaaatcggggcgcgag
catgagctgaccgtcaccgaccgccgcctggcccgcttcgcgcgcgcggtgcaggatctg
ccgggacagcatctgttccaatatctggatgaggaaggcctcgcccggccgatcacctcc
agcgacgtcaacgcctatatagcgcaagcgatgggcggcgatttcaccgccaagcatttc
cgcacctggggcgcttccgtcatcgccttcgaggttttggcggcggaaagcctgtcgctc
aagcagatgatcgcgccggtggcggaagcgctgggcaacaccccggcgatcagccgcaaa
agctatatccaccccgcattgatcgagctttgccgcaacggacaggatgaatggcgcgaa
gggcttcgcctgccgcgcgcaacccgctatctgtcccgttacgaacggggactgatcgcc
ttgttggagagcctggacaccgtttccgcgctcccgctggcggcctga
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