Sphingobium sp. TKS: K426_18370
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Entry
K426_18370 CDS
T04965
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht03030
DNA replication
spht03430
Mismatch repair
spht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K426_18370
03430 Mismatch repair
K426_18370
03440 Homologous recombination
K426_18370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spht03032
]
K426_18370
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_18370
Enzymes [BR:
spht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K426_18370
DNA replication proteins [BR:
spht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K426_18370
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K426_18370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AMK24604
LinkDB
All DBs
Position
1:complement(3725481..3726593)
Genome browser
AA seq
370 aa
AA seq
DB search
MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEASADGAIKLMATDLDLQIVESVSA
QVEQPGATTISAHTLFDIARKLPEGSQVSLQAAEGKMLIQAGRARFNLSTLPRDDFPVIA
EGDLPTSFELPAETLKQIIDKTRFAISTEETRYYLNGIYFHVSDDGQPVLKAAATDGHRL
ARVTVPRPDGADGMPGIIIPRKCIGELRKLLDEVEGSVQISLSASKIRFGLGSAILTSKL
IDGTFPDYSRVIPTANDKLLKIDPRSFEEGVDRVATIATEKTRAVKMTLDRDKITLSVTS
PENGTAAEEVPGAFQGEGFDIGFNARYLLDILGQIDSDLVELHLADAAAPTLIREDDRSP
ALYVLMPMRV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccaccatcgaacgcgcaacgctgctcaagagcctcagccacgtccagtcggtg
gtcgagcggcgcaacacgattccgatcctgtccaacgtgctgatcgaagcatcggcggat
ggcgcgatcaagctgatggcgaccgacctcgacctccagatcgtcgaaagcgtttcggcg
caggtggaacagcctggcgcgaccaccatttccgcccacaccttgttcgacatcgcccgc
aagctgcccgaagggtcgcaggtgtcgctccaggcggccgagggcaagatgctgatccag
gcgggccgcgcccgcttcaacctgtcgaccctgccgcgcgacgatttcccggtgatcgcg
gaaggcgacctgccgaccagcttcgaactgccggccgagacgctgaagcagatcatcgac
aagacgcgcttcgccatctcgaccgaagagacgcgctattacctcaacggcatttatttc
catgtttcggatgacggccagccggtgctgaaggccgccgccaccgacggccatcgcctc
gcccgcgtcaccgtgccgcgtcccgatggcgccgacggcatgccgggcatcatcataccc
cgcaagtgcatcggtgaactccgcaagctgctcgacgaggtcgaaggctcggtccagatt
tcgctgtccgccagcaagatccgctttggccttggtagcgcgatcctgaccagcaagctg
atcgacggcaccttccccgattacagtcgcgtcattccgaccgccaacgacaagctgctc
aagatcgacccgcgcagcttcgaggaaggcgtggaccgcgtcgccaccatcgccaccgaa
aagacccgtgcggtcaagatgacgctggaccgcgacaagatcacgctctccgtcaccagc
cctgaaaacggcacggcggcggaagaagttcctggcgccttccagggcgagggtttcgac
atcggcttcaacgctcgctatctgctcgacatattgggccagatcgacagcgatctggtc
gagctgcatttggccgacgccgccgcgccgacgctgatccgcgaggacgaccgcagcccg
gcgctttacgtgctgatgccgatgcgcgtctga
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