Sphingobium sp. TKS: K426_19050
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Entry
K426_19050 CDS
T04965
Name
(GenBank) Type IV secretion-system TraD DNA-binding domain-containing protein
Organism
spht
Sphingobium sp. TKS
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
T4SS-DNA_transf
TraG-D_C
AAA_16
AAA_19
AAA_22
FtsK_SpoIIIE
DUF87
AAA_5
AAA_7
AAA_30
Zeta_toxin
PIF1
nSTAND3
IstB_IS21
DUF815
AAA_28
AAA
bpMoxR
AAA_24
RuvB_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMK24739
UniProt:
A0A126RRQ1
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All DBs
Position
1:3832008..3834158
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AA seq
716 aa
AA seq
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MSIFRNDTLGSWTRGGQAIVHNVRMTTQVFFQTVLAGLILWLMGTGWYAFEKSTDYQRFV
LAKLVEATIKADAAPGTNDPVLFRTPDGRQYWTSADTLADSGVAKQALHKLEKDLIHGAA
IAGVVALFGLVSAWFYFTRTGKGLGSNEYLRGARFGTASEVRRALRGQKKGALTIGGVAV
PEAFEPEHILLVGAPGTGKTNLITTMLEGIRKQGKRAIVYDTAGSFVEKFYRPGRDILLN
PLDKRTDIWSPWVDVPREYHYDQIAESTIPDKHGDPFWSKAARGTLVAVLRKLARQKHTL
ISVLLDRVLRSPLADLAAYVKGTDAAAFISAEGERTSAGVQAELASVMRSFAYLDDTEDG
FSIRRWVEDEKDDSWLFVTVKADQLPSLRPLITVWLDIAISAIMSLTPDRDRRLYCVIDE
LPTLQKLPSLSDFLARARKYGGCGILGFQSYPQLTATYGKEDAAAITGYCSTWVALRAND
SDTSELISKNLGRVEQVEANEGMSYGVNDMRDGVNLSRMQVTRPLVLDTEVTHLPNLSGF
LRFGRNLPVVRFTDRFNPLPSIAAAFVERTEPPKRLPLGKAIISQAWAERRARQAREEAA
RRGQGPGHPDTPPSPGTGQGDLFTGEANPPPAREPTQEPPSLPDPQDAVPQDEVFGPTDH
SDSGMTDEGAPIDDHPDEENRVATPIPLLGATRGTIRVRLDSHGRSEGPREKAKPA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcttccgcaacgacacgttggggagctggacgcggggcgggcaggcgatcgtc
cacaatgtccgcatgaccacccaggtctttttccagaccgtgctggccgggctgatcctc
tggttgatggggaccggctggtatgcgttcgaaaagtcgaccgactatcagcgcttcgtc
ctcgccaagctggtggaggcgaccatcaaggcggatgcggcgccggggaccaatgacccg
gtgctgttccgcacccccgacgggcgccaatactggacctcggccgacaccctcgccgac
tccggtgtcgcgaagcaggcgctccacaagctcgaaaaggacctcatccacggggcggcc
attgccggtgtggtcgccctcttcggactggtcagtgcctggttctattttacccgaacc
gggaaggggctcggctccaacgaatatctgcgcggcgcccgcttcgggacggcctcggaa
gtgcggcgcgcgctccgagggcagaagaagggggcgctcacaatcggcggcgtcgccgtg
ccggaagccttcgagcccgaacatatcctgctggtcggcgcgcccggcacgggcaagacc
aacctcatcaccaccatgctcgaaggcatccgcaagcagggtaagcgggcgatcgtctat
gacacggccgggagcttcgtcgagaaattctatcgccccggcagggacatcctgctcaac
ccgctcgacaagcgcaccgacatctggagtccctgggtcgatgttccgcgggagtatcat
tacgaccagatcgcggaatccacgatccccgacaaacatggcgatccgttctggagcaag
gccgcgcgcggcacgctggtcgcggtcctgcgcaagctcgcgcggcagaagcacacgctc
atctcggtcctgcttgatcgggtgctgcgttccccgctcgccgatcttgccgcctatgtg
aagggcaccgatgccgccgctttcatctccgccgagggggagcgcacctcggccggcgtc
caggccgagcttgcctcggtcatgcgcagcttcgcctatctcgacgataccgaggacggc
ttctcgatccggcgttgggtcgaggacgagaaggacgacagctggctgttcgtcaccgtc
aaggccgaccagcttccttcgctgcgccccctgatcacggtctggctcgacatcgcgatc
agcgcgatcatgagcctcacgcccgaccgcgaccggcggctctattgcgtcattgacgaa
ttgccgacgctccagaagctccccagcctatccgacttcctcgcccgtgcgcgcaaatat
ggcggctgcggcatattggggttccagtcctatccccagctgaccgcgacctacggcaag
gaggatgcggcggccatcaccggctactgctcgacctgggtcgcgctccgggcgaacgat
agcgacacctcggaacttatctccaaaaaccttggccgggtcgagcaggtcgaagccaac
gaggggatgagctacggcgtcaatgacatgcgcgacggggtgaacctcagtcgcatgcag
gtgacccgcccgctggttctggacaccgaggtcacccatctgccgaacctttcgggtttc
ctccgtttcgggcgcaatctccccgtcgtccgtttcaccgatcgcttcaatccgctgcct
tcgatcgcggccgcgttcgttgaacgcaccgagccccccaaaaggctgccgctcggcaag
gccatcatctcccaggcgtgggcagagcgccgcgcgcgccaggcgcgggaggaggccgcg
aggcgagggcagggtccgggacatccggacacgccgccgtctcccggaacggggcaaggc
gatctttttaccggcgaggccaatcccccgccggcgcgggagccgacccaggagccgccc
agcctgccggatccccaggacgccgtgccgcaggatgaggtgttcggacccaccgaccac
agcgattccggcatgacggacgagggagcgccgatcgacgatcatcccgacgaggagaac
agggttgccacccccatccccttgttgggggcgacgcgcggcacgatccgtgtgcggctc
gacagccatggccgttccgaaggcccgcgtgagaaggcgaagccggcatga
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