Sphingobium sp. TKS: K426_19525
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Entry
K426_19525 CDS
T04965
Name
(GenBank) putative lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spht01011
]
K426_19525
Enzymes [BR:
spht01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
K426_19525
Peptidoglycan biosynthesis and degradation proteins [BR:
spht01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
K426_19525
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Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_16
Motif
Other DBs
NCBI-ProteinID:
AMK24834
UniProt:
A0A126RRW5
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All DBs
Position
1:3946536..3948572
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AA seq
678 aa
AA seq
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MPLIALLLFTAGASAQTETPVPAPAAAYPPGAVVQSIPNSHEPSPWQQAQGRIGMASDPS
ISGTISQWRALQQSDALGFSTYASFIMANPGWPGEDRMRRLAETGINPNSYDPGQVVAFF
TRFPPRTATGNARYALALMQQNRMGEARVAARNAWIGGTLSPDDEARLLPLFGSSWTSVE
HDLRADMLLWKGDIMGAQRMLGLVSPARRPVYEARIAFRQKAPDAPMKMQFAESIGASDA
GFVADKASWLLGTGNWIASRQYLANRPALTFRPGDAEKWYETLLTQARAAANDSQWSFAY
GIASKLDDAYLPGTDVNTRPIGERDDYTSLAWLAGSTAFYNLNRPADAVEMFRRYATAAK
SPQTQSKGFYWAGRAALQAGDAASANSYFARAAVFPDQFYGQLALERLGSPIPAPAAVER
PVEISAAERTAFANRSVVRAVKALGEMGYWEDQSKFARAIANNADSDADHYLAVELAQSI
GRPDMGVMVGRRAVSSGLTGYGTSAFPRVPVPTEAQVNWTMVHAIARQESQFDRQIVSHA
GARGLMQLMPGTAREQAGKLGMSYDPGALNDPSYNIMLGSSYFQRMLDYYGGSYPLAVAA
YNAGPGNVNRWISANGDPRLPGADMLRWIEQIPLFETRNYVQRVLENAVVYEAMNPQRAR
FRGTMTPLSKYLGKQTPG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgattgctcttttgctttttaccgcaggcgccagcgcccagacggaaacgccc
gtgccagcacccgctgcggcctatccgccgggcgccgtggtgcagtcgattcccaattcc
catgagccgagtccctggcaacaggcgcagggccgaatcggcatggcgagcgatcccagc
atctccggcacgatcagccagtggcgcgcgctccagcaaagcgatgccctgggcttttcg
acctatgccagcttcatcatggccaatcccggctggccgggcgaggaccggatgcggcgg
ctggcggaaaccggcatcaaccccaacagctatgatccgggtcaggtcgtcgccttcttc
acccgcttccctccgcgcaccgccaccggcaatgcgcgctatgcgctggcgctgatgcag
cagaatcgcatgggcgaagcgcgggtcgccgcgcgcaatgcctggatcggcggcacgctg
tcgcccgatgacgaagcgcggctgctcccgctcttcggttcaagctggacctcggtcgaa
catgacctgcgcgccgacatgctgctgtggaagggcgacatcatgggcgcacagcggatg
cttggccttgtctcgcccgcccgccgcccggtctatgaggcgcgcatcgctttccgccag
aaggcgccggatgccccgatgaaaatgcagtttgcggaaagcatcggcgcgagcgacgcg
ggtttcgtcgcggacaaggcaagctggctgctgggcaccggcaactggatcgccagccgc
caatatctcgccaaccgcccggcgctgaccttccgtcccggcgacgcggaaaaatggtat
gagacgctgctcacacaagcccgcgccgccgcaaatgacagccagtggagcttcgcctac
ggcatcgccagcaagctggacgacgcctatctgcccggcaccgacgtcaacacgcgcccg
attggcgagcgcgacgattataccagcctcgcctggctggcggggtcgacggccttctac
aatctgaaccggcccgccgacgcggtggagatgttccgccgctacgccaccgccgccaaa
tcgccgcagacccagtccaagggcttttattgggccgggcgcgccgcactccaggcgggc
gatgccgccagcgcgaacagctatttcgcccgcgccgccgtcttcccggaccagttttac
ggccagctcgcgctcgaacggctgggcagcccgatcccggcccctgccgctgtcgagcgc
ccggtggaaatttccgctgccgaacgcaccgccttcgccaaccgctcggtcgtccgggcg
gtgaaggcgctgggcgaaatgggctattgggaggatcagagcaaattcgcccgcgccatc
gcgaacaatgccgacagcgacgcggaccattatctggccgtcgaactggcgcagagcatc
ggccgtcccgacatgggcgtgatggtcggccgccgcgccgtgtcgagcggcctcaccggc
tatgggacaagcgccttcccgcgcgtgccggttccgaccgaagcgcaagttaactggacc
atggtccacgccatcgcccggcaggaaagccagttcgaccggcagatcgtcagccatgcg
ggcgcgcgcggcctgatgcagctcatgcccggcacggcgcgggagcaggcggggaaactg
ggcatgagttatgaccccggcgcgctcaacgatcccagctacaacatcatgctgggctcc
tcctatttccagcggatgctcgactattatggcggcagctatccgctggcggtggcggcc
tataatgccgggccgggcaatgtgaaccgctggatcagcgccaatggcgacccgcgcctg
cccggcgctgacatgctgcgctggatcgagcagattccgctgttcgagacgcgcaactat
gtccagcgggtgctggaaaatgccgtggtctacgaagcgatgaacccgcagcgcgcgcgt
ttccggggcacaatgacgccgctgtccaaatatctcggcaagcagacaccgggctga
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