Sphingobium sp. TKS: K426_20090
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Entry
K426_20090 CDS
T04965
Name
(GenBank) AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
spht
Sphingobium sp. TKS
Pathway
spht04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
K426_20090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spht03019
]
K426_20090
03009 Ribosome biogenesis [BR:
spht03009
]
K426_20090
04131 Membrane trafficking [BR:
spht04131
]
K426_20090
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spht04147
]
K426_20090
Messenger RNA biogenesis [BR:
spht03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
K426_20090
Ribosome biogenesis [BR:
spht03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
K426_20090
Membrane trafficking [BR:
spht04131
]
SNARE
SNARE associated proteins
Others
K426_20090
Autophagy
Aggrephagy
Other aggrephagy associated proteins
K426_20090
Exosome [BR:
spht04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K426_20090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_33
CDC48_2
AAA_2
TIP49
AAA_14
IstB_IS21
NACHT
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
AAA_18
AAA_30
Mg_chelatase
AAA_7
AAA_17
AAA_19
AAA_24
AAA_11
AAA_3
ABC_tran
Sigma54_activat
TsaE
ATPase_2
DUF815
Zeta_toxin
AAA_lid_PRS2_C
Parvo_NS1
ATPase
Vps4_C
NB-ARC
SLFN-g3_helicase
PhoH
bpMoxR
Sigma54_activ_2
Viral_helicase1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMK24947
UniProt:
A0A126RS50
LinkDB
All DBs
Position
1:complement(4055599..4057890)
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AA seq
763 aa
AA seq
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MAEEETAGRRIQVANARPEDAGRGLARLPVAVMAELHLAEGDVIEIAGKRSTPARVVRPY
KEDEGLDVLRLDGLQRANAGVGSGDFVLISKVEPRPAQRVVFAPAQNNLRLQGNPEALKR
VFFQRPLASGDIVATAGQQQVPPGDMPPQLRQMLAAPAYALQEIRLVVVSTVPKGFVMLD
ADTEVELRAEYEEPRESRRADVTYDDVGGMAEAIDQLREMVELPLRYPELFERLGVDPPK
GVLLHGPPGTGKTRLARAVANESEAEFFLINGPEIMGSAYGESEKQLREIFEAAAKAVPS
ILFIDEIDSIAPKRGNVTGETEKRLVAQLLTLMDGLEPRTNLVVIAATNRPEAIDEALRR
PGRFDREIIVGVPDERGRREILGIHTRGMPLGDKVDLSELARMTYGFVGADLAALTREAA
IETVRRFMPRLNLEEGTIPPDVLEELSVTREDFMAAIKRVQPSAMREVMVQAPNIGWADI
GGLDDAQMRLKEGVELPLKDPDAFRRIGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANF
IATKSSDLLSKWYGESEQQIARLFARARQVAPTVIFIDELDSLVPARGGGLGEPQVTERV
VNTILAEMDGLEELQSVVVIGATNRPTLIDPALLRPGRFDELIYVPVPDRAGRRRILSIH
TGKMPLAQDVDLDVLAERTERFTGADLEDLVRRAGLVALRQSLSVDKVTQAHFEAALEDT
RASVTPEMEREYEQIQATLKQSVMQVDPIGFVAPGMLRPRNRD
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaagaagaaaccgcaggacgcaggatacaggtggccaacgcccggccggaagat
gcggggcgcgggcttgcgcgcctgccggtggcggtgatggcggaactccatctggccgaa
ggcgatgtgatcgagatcgcgggcaagcgctccacccccgcgcgggtggtgcggccctat
aaggaggatgaggggcttgacgtcctgcgcctcgacgggcttcagcgcgcgaatgccggg
gtcggatcgggcgacttcgtcctgatcagcaaggtcgaaccacgccctgcccagcgcgtc
gtcttcgcgcctgcacaaaataatttgcggttgcagggcaatcccgaagcgttgaagcgg
gttttcttccaacggccgctcgcctccggcgatatcgtcgccacggcgggacagcaacag
gttccgcccggcgacatgccgccccaattgcgccagatgctggccgcgcccgcctacgcc
ctgcaggaaatccggctggtggtggtgtcgacggtgcccaagggcttcgtgatgctcgac
gccgacaccgaagtcgaactgcgcgccgaatatgaggagccgcgcgaatcccgccgcgcc
gacgtcacctatgacgatgtcggcggcatggcggaggcgatcgaccagttgcgcgagatg
gtggagctgccgctgcgctatcccgaactgttcgagcggctgggagtcgatccgcccaag
ggcgttctgctccacggcccgccgggaaccggcaagacccggctcgcccgcgccgtcgcc
aatgaatcggaagcggaattcttcctgatcaacggcccggagatcatgggttcggcctat
ggcgagtcggaaaagcagctccgcgagattttcgaggccgccgccaaggctgtgccgtcg
attctcttcatcgacgagatcgattcgatcgcgcccaagcggggcaatgtgaccggcgag
acggaaaagcgcctcgtcgcgcaattgctgacgctgatggacgggctggagccgcgcacc
aacctggtcgtcatcgccgcgaccaaccggcccgaggcgattgacgaggcgctgcgccgt
cccggccggttcgaccgcgaaatcatcgtaggcgttccggacgagcgcgggcggcgggaa
atattgggcatccacacccgcggcatgccgttgggcgacaaggtcgacctcagcgaactc
gcccgcatgacctatggctttgtcggcgctgacctcgccgcgctcacccgcgaggcggcg
atcgagacggtgcgccgtttcatgccgcgcctcaatctggaggaagggacgatcccgccc
gatgtgctggaggaactctccgtcacgcgggaggatttcatggcggcgatcaagcgcgtc
cagccctccgccatgcgcgaggtgatggtgcaggcgccgaacatcggctgggccgatatc
ggcgggctggacgatgcgcagatgcgcctcaaggaaggggtggaactgccgctcaaggat
ccggacgccttccgccggatcggtatccgcccggccaagggtttcctgctctatggcccg
cccggcaccggcaagacgctgctggcgaaggcggtggcgcgggaagcgcaggccaatttc
atcgcgaccaaatcgtccgacctgctgagcaaatggtatggggagagcgaacagcagatc
gcccgcctcttcgcccgcgcaaggcaggtggcgccgacggtcatcttcatcgacgaactg
gacagcctggtccccgcgcggggcggcggcctgggcgaaccacaagtgacggagcgggtg
gtgaacaccatcctggccgagatggacgggctggaggagctgcaatcggtggtcgtcatc
ggcgcgaccaaccggccgacgctgatcgatccggcgctgctgcggccagggcggttcgat
gaactgatctatgtccccgtgccggatcgggccgggcgcaggcgcatcctgtccattcat
accggcaagatgccgctggcgcaggacgttgatcttgatgtgctggccgagcgcaccgaa
cgcttcaccggcgccgatctggaggatctggttcgccgggcggggctggtcgcgctgcgc
cagtcgctctcggtggacaaggtgacgcaggcccatttcgaagcggcgctggaggacacc
cgtgcctccgtcacgcccgaaatggagcgtgaatatgagcagatccaggccacgctcaag
caaagcgtgatgcaggtcgatcccatcggctttgtcgcgcccggcatgttgcgcccccgc
aaccgggactga
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