KEGG   Sphingobium sp. TKS: K426_20315
Entry
K426_20315        CDS       T04965                                 
Name
(GenBank) dihydropyrimidine dehydrogenase subunit A
  KO
K00266  glutamate synthase (NADPH) small chain [EC:1.4.1.13]
Organism
spht  Sphingobium sp. TKS
Pathway
spht00250  Alanine, aspartate and glutamate metabolism
spht00910  Nitrogen metabolism
spht01100  Metabolic pathways
spht01110  Biosynthesis of secondary metabolites
spht01120  Microbial metabolism in diverse environments
spht01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:spht00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    K426_20315
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    K426_20315
Enzymes [BR:spht01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.1  With NAD+ or NADP+ as acceptor
    1.4.1.13  glutamate synthase (NADPH)
     K426_20315
SSDB
Motif
Pfam: Fer4_20 Pyr_redox_2 Pyr_redox_3 Pyr_redox NAD_binding_8 NAD_binding_7 HI0933_like AlaDh_PNT_C FAD_binding_3 2-Hacid_dh_C MurD-like_N DAO Amino_oxidase Thi4 3HCDH_N Glu_dehyd_C NAD_binding_2 FAD_oxidored ApbA zf-HIT zf-MYND Fer4_17
Other DBs
NCBI-ProteinID: AMK24992
UniProt: A0A126RSD3
LinkDB
Position
1:4095539..4096990
AA seq 483 aa
MADNPMLKFVGTGQAYPEKRSADDRADDFLEISRSFILDKAEEQASRCSQCGVPYCSTHC
PLHNHIPDWLRLTAEGRLREAYELSNLTSTMPEICGRICPQDRLCEGNCVIEFSGHGSVT
IGSVEKFITDTAWKEGWVEPLAPGAATGQSVGVIGAGPAGLTTAEYLRVAGYEVHVYDRH
DRAGGLLTYGIPGFKLEKDVVMRRIQRLKDGGITFHESFEVGRDATMEELRSRHDAVLIA
TGVYKPRDIKAPGVGAPGVVKALDFLIASNKAGFGDAVPEHEDGSLHANGKKVVVIGGGD
TAMDCVRTAVRQGATSVKCLYRRDRDNMPGSQREVANAEEEGVEFVWLSAPIAFEGTEHV
TGVKVTKMRLGQPDASGRRAPEADPGTEHTLEADLVIKALGYDPEELPKLFGAEDLSVTR
WGTLRVDHKTMMTSMDGVFAAGDIVRGASLVVWAIRDGRDVTEHMHRYLKAKAKASAGER
QAA
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggctgacaatccaatgctgaaattcgtgggaacgggccaagcctatcccgagaagcgt
tcggccgacgatcgcgccgacgacttcctcgaaatcagtcgcagcttcatcttggacaag
gcggaagaacaggcgtcgcgctgctcgcaatgcggcgtgccctattgctcgacccattgc
ccgctgcacaaccatatccccgactggctgcgcctgacagccgaggggcggttgcgcgag
gcctatgagctgtcgaacctgaccagcaccatgccggaaatctgcggccgcatctgcccg
caggatcgcctgtgcgaaggcaattgcgtcattgaattttcgggccacggttccgtcacc
atcggctcggtggaaaagttcatcaccgacaccgcctggaaggaaggctgggtcgaaccg
ctggcgccaggcgcagcgaccggccagtcggtcggcgtcatcggcgcgggtccggcgggg
ctgaccacagcggaatatctgcgggtcgcgggctatgaagtgcatgtctacgaccgtcat
gatcgcgcaggcggcctgctgacctatggcatccccggcttcaagctggagaaggacgtc
gtcatgcgccgcatccagcgcctcaaggacggcggcatcaccttccatgaaagcttcgag
gtcggccgcgacgctacgatggaggaactgcgcagccgccacgatgcggtgctgatcgcc
accggcgtctacaagccccgcgacatcaaggcgccgggcgtcggcgcgccgggcgtggtc
aaggcgctcgacttcctgatcgcctccaacaaggccggtttcggtgacgccgtgccggag
catgaggatggctcgctgcacgccaatggcaagaaggtcgtcgtcatcggcggcggcgac
acggcgatggactgtgtccgcaccgccgtccgtcagggcgcgacttcggtcaagtgcctc
taccgccgcgaccgcgacaatatgcccggctcgcagcgcgaagtcgccaatgccgaggaa
gagggcgtggagttcgtctggctctccgcccccatcgccttcgaaggcacggagcatgtc
accggcgtcaaggtcaccaagatgcgcctcggccagcccgacgcatcgggccgccgcgcg
ccggaagccgatccgggcacggagcacacgctggaggccgatctcgtgatcaaggcgctg
ggctatgatccggaagaactgcccaagctgttcggcgcggaggatctgtcggtcacccgc
tggggcacgctgcgcgtcgatcacaaaacgatgatgaccagcatggacggcgtgttcgcc
gctggcgacatcgtgcgcggcgcttcgctggtggtctgggcgatccgcgacggccgcgac
gtgaccgagcatatgcaccgctatctcaaggcaaaggccaaggcctctgccggggaaagg
caagccgcttaa

KEGG   Sphingobium sp. TKS: K426_20320
Entry
K426_20320        CDS       T04965                                 
Name
(GenBank) glutamate synthase
  KO
K00265  glutamate synthase (NADPH) large chain [EC:1.4.1.13]
Organism
spht  Sphingobium sp. TKS
Pathway
spht00250  Alanine, aspartate and glutamate metabolism
spht00910  Nitrogen metabolism
spht01100  Metabolic pathways
spht01110  Biosynthesis of secondary metabolites
spht01120  Microbial metabolism in diverse environments
spht01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:spht00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    K426_20320
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    K426_20320
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:spht01002]
    K426_20320
Enzymes [BR:spht01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.1  With NAD+ or NADP+ as acceptor
    1.4.1.13  glutamate synthase (NADPH)
     K426_20320
Peptidases and inhibitors [BR:spht01002]
 Cysteine peptidases
  Family C44
   K426_20320
SSDB
Motif
Pfam: GATase_2 Glu_synthase Glu_syn_central GXGXG FMN_dh RETICULATA-like
Other DBs
NCBI-ProteinID: AMK24993
UniProt: A0A126RRY0
LinkDB
Position
1:4097082..4101620
AA seq 1512 aa
MANTPYMASPEERARLAAEGMYHPEMEGDACGVGLVAATDGRPSRRVVASAIDALKAVWH
RGAVDADGKTGDGAGIHVDLPVRFFDDAIADSGHKPLPNRLAVGMIFLPRTDLSAQETCR
TIVEAEIIDAGYTIYGWRQVPVDVSVIGEKAQRTRPEIEQIMIAGPMPEERDQAEFEKDL
YLIRRRIEKQVIAAQIQDFYVCSLSCRSIIYKGLFLAESLSVFYPDLQDERFESRVAIFH
QRYSTNTFPQWWLAQPFRTLAHNGEINTIRGNKNWMKSHEIKMASLAFGEQSEDIKPVIP
AGASDTAALDAVFEAICRSGRDAPTAKLMLVPEAYQSASPELPQSHSDMYEYLASVMEPW
DGPAALAMTDGRWVVAGVDRNALRPLRYTLTGDNLLIVGSETGMVVVPETTIVRKGRMGP
GQMIAVDLQEGVIFDDKEIKDQIAGERPYGELIKDFMTVNDLADAPSALRSWDKAELTRR
QVAANMTLEDMELILAPMVEDAKEAVGSMGDDTPLAVISDKPRTVSHFFRQNFSQVTNPP
IDPLRERYVMSLKTRFSNLHNILEHDAQNSHVLVLDSPVLTSSEWAKLQGHFGPAVAEID
CTFPAEGNQEQLRAAIARIREEAEQAVREGRTEIFLTDEHLNSDKIAIAGVLAAAAVHTH
LVRKGLRSYASINVRCAEALDTHYFAVLIGVGATTVNAYLAEASIADRHARGLFGDLSLD
QCFERYRIAINEGLLKIMSKMGIAVISSYRGGYNFEAVGLSRALVNDLFPGMPAKISGEG
YASLHYSAKLRHDTAYDSAVVRLPVGGFYRQRNGGETHAYSAQLMHLLQTSVATDSYSTY
LQFSRGVRDLPPVYLRDLLEFNFAREAVPIDEVEATTEIRKRFVTPGMSLGALSPEAHET
LAIAMNRIGAKAVSGEGGEDANRFKPYENGDNANSVIKQIASGRFGVHAEYLGSAEEIEI
KVAQGAKPGEGGQLPGFKVTEFIAKLRHATPGVTLISPPPHHDIYSIEDLAQLIYDCKMI
NPRARVCVKLVSQAGIGTVAAGVAKAHADVILVAGHVGGTGASPQTSVKYAGTPWEMGLS
EANQVLTLNGLRHRVKLRTDGGLKTGRDIVIAAILGAEEFGIGTLSLVAMGCIMVRQCHS
NTCPVGVCVQDERLREKFTGTPEKVINLMTFIAEEVREILARLGYRSLDEVIGRTELLKQ
VNRGAEHLDDLDLNPILAKVDAPDDQRRFSLTEWRNAVPDSLDAQMMRDAKAVFERGEKM
QLTYTVRNTHRAVGTRLSAAVTEKFGMSSLADGHLTVRLRGSAGQSLGAFLCKGIKLEIF
GDANDYVGKGLSGGIITVRTTVSSPLSSKDNTIIGNTVLYGATSGKLFAAGQAGERFAVR
NSGAQVVVEGCGANGCEYMTGGTAVILGKTGANFGAGMTGGMAFILDEDGSFPTRANPES
IVWQRLESAHWEAELKALIAQHAVATDSKWSNTILDDWDRWRRYFWQICPKEMVNRLAHP
LSDAPAEVVAAE
NT seq 4539 nt   +upstreamnt  +downstreamnt
atggccaacaccccctatatggcgagccccgaagagcgtgcgcgccttgccgctgagggc
atgtatcatcccgagatggaaggcgatgcctgcggcgtcggcctggtcgccgcgacggat
ggccgcccgagccgccgtgtggtcgccagcgcgatcgacgcgctgaaggcggtatggcac
cgtggcgcggtcgatgccgacggcaagaccggcgacggcgcgggcatccatgtcgacctg
ccggtgcgcttcttcgacgatgcgatcgcggattcgggccacaagccgctgcccaaccgg
ctcgccgtcggcatgatcttcctgccgcgcaccgacctgtcggcgcaggaaacctgtcgc
accatcgtcgaggccgagatcatcgacgcgggctacaccatctatggctggcgccaggtg
cccgtcgacgtctccgtcatcggggagaaggcgcagcgcacccgtcccgagatcgaacag
atcatgatcgccgggccgatgccggaggagcgcgatcaggccgagttcgaaaaagacctc
tacctcatccgccgccggatcgagaagcaggtcatcgccgcgcagatccaggacttctac
gtctgctcgctgtcgtgccgctcgatcatctacaagggcctgttcctcgcggaatcgctg
tcggtcttctatcccgaccttcaggacgagcggttcgagagccgcgttgcgatcttccac
cagcgctattcgaccaacaccttcccgcaatggtggctggcccagcccttccgcacgctc
gcgcataatggcgagatcaacacgatccgcggcaacaagaactggatgaagagccacgag
atcaaaatggcttcgctcgccttcggtgagcagtcggaggacatcaagcccgtgatcccg
gcgggcgcgtccgataccgccgcgcttgacgccgtgttcgaggcgatctgccgttcgggc
cgcgatgcgccgaccgccaagctgatgttggtgcccgaagcctatcagtcggccagcccc
gaactgccgcagtcccattcggacatgtacgaatatctcgcctccgtgatggagccgtgg
gacggtcccgccgcgctggcgatgaccgacggccgctgggtcgtggcgggcgtcgaccgc
aacgcgctgcgcccgctgcgctatacgctgaccggcgacaatctgctgatcgtgggttcg
gaaaccggcatggtcgtggtgcccgaaaccaccatcgtgcggaagggccgcatgggtccg
ggccagatgatcgccgtcgacctgcaggaaggcgtgatcttcgatgacaaggagatcaag
gaccagatcgcgggggagcgcccctatggcgagctgatcaaggacttcatgacggtcaac
gatctggccgacgcgccgagcgcgctgcgtagctgggacaaggccgaactgacccgccgt
caggtcgccgccaacatgacgctggaggatatggagctgatcctcgccccgatggtcgag
gatgcgaaggaagccgtcggctcgatgggcgacgacacgccgctcgcggtcatttccgac
aagccgcgcacggtcagccatttcttccgccagaatttcagccaggtcaccaacccgccg
atcgatccgctgcgggagcggtatgtcatgagcctgaagacgcgcttctccaacctgcac
aacatattggagcatgacgcgcagaacagccatgtgctggtgctggattcgccggtgctg
acctcgtccgaatgggcgaagctccaagggcatttcggcccggccgtggccgagatcgac
tgcaccttcccggccgaaggtaaccaggagcagctccgcgccgccatcgcccgcatccgg
gaggaagcggaacaggccgtgcgcgagggccgcaccgaaatcttcctgaccgacgagcat
cttaattctgataagatcgccattgccggggtgctggcggcggcggctgtgcatacccat
ctcgtccgcaaggggctgcgcagctacgcgtcgatcaacgtgcgctgtgccgaagcgctc
gacacccattatttcgcggtgctgatcggcgtcggcgcgaccacggtgaacgcctatctg
gccgaggccagcattgccgaccgccatgcacgcgggctgttcggtgacctgtcgctcgac
cagtgcttcgaacgctatcgcatcgccatcaacgaaggcctgctgaagatcatgtccaaa
atgggcatcgcggtcatcagctcctatcgcggcggctataatttcgaagccgttggtctg
tcccgcgcgctggtcaacgatctcttccccggcatgcccgcgaagatttccggcgaaggc
tatgcttcgcttcactatagcgcgaagctgcggcacgacaccgcctatgatagcgccgta
gtgcgtctgccggtcggcggcttctaccgtcagcgcaatggtggcgagacccacgcctat
tcggcgcaactcatgcacctgttgcagacctcggtcgcgaccgacagctattcgacctat
ctgcaattctcacggggcgtgcgcgatttgccgccggtctatctgcgcgacctgctggag
ttcaacttcgcccgcgaagccgtgccgatcgacgaggtcgaggcgaccaccgagatccgc
aagcgcttcgtgacgccgggcatgtcgcttggcgcgctgtcgcccgaagcgcatgagacg
ctggccatcgcgatgaaccgcatcggcgccaaggccgtgtcgggcgaaggcggcgaggat
gcgaaccgcttcaagccctatgagaatggcgacaatgcgaactcggtgatcaagcagatc
gcgtcgggccgcttcggcgtccatgccgaatatctggggtcggccgaggaaatcgagatc
aaggtcgcgcagggcgccaagcccggcgagggtggccagctccccggtttcaaggtgacc
gagttcatcgccaagctgcgccatgcgacgcccggcgtgacgctgatctcgccgccgccg
caccatgacatctactcgatcgaggatctggcgcagctcatctacgactgcaagatgatc
aatcctcgcgctcgcgtttgcgtgaagctggtcagccaggcgggcatcggcaccgtggct
gcgggcgtggctaaggcccatgccgacgtcatcctggtcgcgggccatgtcggcggcacc
ggcgcatcaccccagacctccgtcaaatatgcgggcacgccgtgggaaatgggcctgtcg
gaagccaatcaggtgctgaccctcaacggtctgcgtcaccgcgtgaagctgcgcaccgac
ggcggcctcaagactggccgcgacatcgtgatcgcggcgattctgggcgccgaagagttc
ggcatcggcacgctgtcgctggtggcgatgggctgcatcatggtgcgtcagtgccacagc
aacacctgcccggtcggcgtctgcgtgcaggatgaacgcctgcgcgagaagttcaccggc
acgccggagaaggtcatcaacctcatgaccttcatcgcggaagaggttcgcgagattctc
gcccgtctgggctatcgcagcctggacgaagtgatcggccgcaccgaactgctcaagcag
gtcaaccgcggcgccgagcatctggacgatctcgacctgaacccgatcctcgccaaggtg
gacgcacccgacgatcagcgccgtttctcgctgaccgaatggcgcaatgccgttcccgac
agccttgacgcgcagatgatgcgcgacgccaaggcggtgttcgagcggggcgagaagatg
cagctcacctacacggtgcgcaacacgcatcgcgccgtgggcacccgcctgtcggccgcc
gtgaccgagaagttcggcatgtctagcctggcggacggtcatctgaccgtgcgtctgcgc
ggctcggctggccagtcgctgggcgccttcctctgcaagggcatcaagctggagatcttt
ggcgacgccaacgactatgtcggcaagggtctgtcgggcggcatcatcacggtgcgcacg
accgtctccagccccttgagcagcaaggacaacacgatcatcggcaacaccgtgctctac
ggcgcgaccagcggcaagctgttcgcggcgggacaggccggggaacgcttcgccgtccgc
aattcgggcgcgcaggtggtggtcgagggctgcggcgccaatggctgcgaatatatgacc
ggcggcacggcggtgatcctgggcaagaccggcgccaatttcggcgcgggcatgaccggc
ggcatggccttcatcctggacgaggatggtagcttccctacgcgcgccaacccggaaagc
atcgtctggcagcgactggaaagcgcccattgggaagcggagctgaaggctctgatcgcc
cagcatgcggtggcgaccgacagcaaatggtcgaacaccatcctggacgactgggaccgc
tggcgccgttatttctggcagatttgcccgaaggaaatggtgaaccgcctcgctcatccg
ctgagcgacgctccggcggaagtggtcgccgccgaataa

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