Sphingobium sp. TKS: K426_23169
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Entry
K426_23169 CDS
T04965
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00630
Glyoxylate and dicarboxylate metabolism
spht00680
Methane metabolism
spht01100
Metabolic pathways
spht01120
Microbial metabolism in diverse environments
spht01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K426_23169
09102 Energy metabolism
00680 Methane metabolism
K426_23169
Enzymes [BR:
spht01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K426_23169
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_9
Fer4_6
Fer4_8
Fer4_2
Fer4_16
Fer4_15
Fer4_4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
AMK25537
UniProt:
A0A126RTS4
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Position
2:complement(496412..499258)
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AA seq
948 aa
AA seq
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MTYTREADHGTPPAVATSKSVTLTIDGDMVTMPEGTSIMRAASLTGCSIPKLCATDNVES
FGSCRLCLVEVEGRNGYPASCTTPIAEGMVVRTQSERLKQLRRGVMELYISDHPLDCLTC
PANGDCELQEQAGAVGLRDVRYGYDGATNMGQAKDQSNPYFDFDPSKCIVCSRCVRACDE
VQGTFALTIEGRGFDSKVSPSQGQDFLSSECVSCGACVQACPTATLTEKKVVEIGTPDRA
VVTTCAYCGVGCTFRAEMRGEELVRMVPWKEGKANHGHSCVKGRFAWGYAQHRDRILKPM
IRASVDEPWREVSWEEAIAHTASEFKRIQAKYGTRSIGGITSSRCTNEETFLVQKLIRQG
FGNNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVAEADVILVIGANPTDGHPVFASR
MKKRLREGAKLIVIDPRRIDLVKSPHVEAAHHLPLRPGTNVAMLTAMAHVIVTENLFDEA
FIRDRCDWDEFMDWAAFVAEPSRSPEAIEPLTGVKAEEVRAAARLYATGGNAAIYYGLGV
TEHSQGSSTVMAIANLSMATGNVGREGVGVNPLRGQNNVQGACDMGSFPHEFSGYRHVSD
DAVRGQFERAWGVTLDAEPGLRIPNMLDAATDGTFKGIFIQGEDILQSDPNTHHVAAGLA
AMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRIQRVRKVMAPLNGYGDWEI
VQLVAQAMGLGWSYAHPSEIMDEIAALTPTFAGVHYDRLDVEGSLQWPANDAAPDGTPTM
HIDGFVRGRGKFVVTDYVPTDEKTGPRFPLLLTTGRILSQYNVGAQTRRTANEAWHPEDR
LEIHPADAENRGIKDGDWVSLKSRAGETSLRALITERVAPGVVYTTFHHPDTQANVITTD
YSDWATNCPEYKVTAVQVMPSNGPSDWQRDYADQARHSRRIAPLAAAQ
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgacctatacgcgcgaagccgatcatggaacgccgcctgctgtcgcgacgagcaagagc
gtgaccctcaccatcgatggcgatatggtcaccatgccggagggcacgtcgatcatgcgg
gcggcttcgctgaccggctgctcgatcccgaaactgtgcgcgacagacaatgtcgagagc
ttcggctcctgccgcctctgtctggtcgaagtcgaagggcgcaatggctatcccgcttcc
tgcaccacgccgattgccgagggcatggtggtgcggacgcagagcgagcggttgaagcag
ttgcggcgcggggtgatggagctttacatctccgaccatccgctcgactgcctgacctgc
ccggctaatggcgattgcgagttgcaggaacaggcgggcgcggtgggcctgcgcgacgtg
cgctatggctatgatggcgcgaccaatatggggcaggcgaaggaccagtcgaacccctat
ttcgacttcgaccccagcaaatgcatcgtctgttcgcgctgcgtgcgggcttgcgacgag
gtgcaggggacttttgcgctgaccatcgagggaaggggcttcgattccaaggtttcccca
tcccaagggcaggatttcctgtcgtccgaatgcgtgtcctgcggcgcctgcgtccaggcc
tgcccgaccgccacgctgaccgagaaaaaggtggtggagatcggcacgccggaccgggcg
gtcgtgaccacctgcgcctattgcggcgtcggctgcaccttccgcgccgagatgcggggc
gaggagctggtgcggatggtgccgtggaaggagggcaaggccaatcacgggcatagctgc
gtgaagggccgcttcgcctggggctatgcccagcatcgcgaccgcatcctgaagccgatg
atccgcgcttcggtggacgaaccctggcgcgaggtgtcgtgggaggaggccatcgcccat
accgccagcgagttcaagcgcatccaggcaaaatatggcacgcgcagcatcggcggcatc
acctccagccgctgcaccaatgaggagaccttcctcgtccagaagctgatccggcagggt
ttcggcaacaataatgtagatacctgcgcgcgggtctgccattccccgacgggctatgga
ttgaagacgacgttcggcacttcggcgggcacgcaggatttcgacagcgttgccgaggcc
gacgtcattctggtcatcggcgccaatccgaccgacggccatcccgtcttcgccagccga
atgaagaagcggctgcgcgagggcgcgaagctgatcgtcatcgatccccggcggatcgat
ctggtgaagtcgccccatgtcgaggcggcgcatcatctgccgctgcggcccggcaccaat
gtcgccatgctgacggcgatggcgcatgtgatcgtgacggaaaatctcttcgacgaagcc
ttcatccgggatcgttgcgactgggatgaatttatggactgggcggccttcgtcgctgaa
cccagccgctcgcccgaggcgatcgagccgctgacgggggtgaaggcggaagaggtgcgc
gcggcggcgcggctttatgccaccgggggtaacgccgcgatctactatggtcttggcgtc
accgagcatagtcaagggtcgtccaccgtcatggcgattgccaacctctccatggcgacc
ggcaatgtcgggcgcgagggcgtcggcgtgaaccctttgcgcgggcagaataatgtgcag
ggcgcctgtgacatgggcagcttcccgcacgaattttccggctatcgccatgtgtcggac
gatgctgtgcgcggccagttcgagcgggcctggggcgtgacgctggatgccgagccgggc
ctgcgcatccccaatatgctcgacgcggcgacggacgggacgttcaagggcatcttcatc
cagggcgaggatattcttcagtccgaccccaatactcatcatgtcgcggcgggccttgcc
gcgatggaatgcgtggtggtgcaggatctgttcctcaatgagaccgccaattacgcccat
gtcttcctgccggggtcgacctttctggagaaggatggaaccttcaccaatgccgaacgg
cgcatccagcgcgtgcgcaaggtgatggcgccgctcaatggttatggcgattgggagatc
gtccagcttgttgcgcaggccatggggcttggctggtcctatgcgcatccgtccgagatc
atggacgagatcgccgcgctgaccccgaccttcgcgggcgtgcattatgaccggctggac
gtggaaggatcgctgcaatggcctgccaatgacgcggcgccggacgggacgccgaccatg
catatcgacggcttcgtgcgcggcaggggcaaattcgtcgtcaccgactatgtgccgacc
gatgagaaaaccgggccgcgcttcccgctgttgctgacgaccggccgcatcctcagccaa
tataatgtcggcgcgcagacgcggcggacggcgaacgaggcctggcatccggaggaccgg
ctggaaatccatccggccgatgcggagaaccggggaatcaaggatggcgattgggtctcg
ctcaagagccgggccggggaaaccagtctgcgcgcattgatcaccgagcgggtcgcgccg
ggcgtggtctacaccaccttccaccatcctgatacgcaggccaatgtcatcaccaccgac
tattcggactgggccaccaactgcccggaatataaggtgacggcggtacaggtcatgccc
tccaacgggccaagcgactggcagcgcgactatgccgatcaggcccgccacagcaggcgg
attgcgccgctggcagcggcgcaatag
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