Sphingobium sp. TKS: K426_23409
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Entry
K426_23409 CDS
T04965
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00061
Fatty acid biosynthesis
spht00071
Fatty acid degradation
spht01100
Metabolic pathways
spht01212
Fatty acid metabolism
spht02024
Quorum sensing
spht04146
Peroxisome
Module
spht_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K426_23409
00071 Fatty acid degradation
K426_23409
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K426_23409
09145 Cellular community - prokaryotes
02024 Quorum sensing
K426_23409
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spht01004
]
K426_23409
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spht04147
]
K426_23409
Enzymes [BR:
spht01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K426_23409
Lipid biosynthesis proteins [BR:
spht01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K426_23409
Exosome [BR:
spht04147
]
Exosomal proteins
Exosomal proteins of breast milk
K426_23409
Exosomal proteins of breast cancer cells
K426_23409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
KNOX1
Motif
Other DBs
NCBI-ProteinID:
AMK25585
UniProt:
A0A126RVF4
LinkDB
All DBs
Position
2:complement(547700..549286)
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AA seq
528 aa
AA seq
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MPDADWLVPPETRLSMPGAPASVARMIDGPARETPDKIALIGRHARLSYAELDQKADAAV
ALLIELGVKPGDRVAATAANGADLITAFLACQRIGAIWVGINRNYAPAEKRYFLEDSGAS
LYLGDRDAIAQTAAAGIVALEMEPGDEQCAWAQALARHAGHTRPAVGLDPWAPAAIAYTS
GTTGRPKGAVHSQHNMIVAATMSQVMSQDDSDQVVRGMTSPMTILNMMILGAIATLSRGD
RLVCMDRTDSRGVADWIREERITTTNLVPTIVYDLLTRPDIPAEDLASLRWLVVGGAMVP
EGLPRLYEERFGTRMTTGYGQTELPTTISRTHEYSATVQGAVGRPLPHLEVAIRDEDDCE
LPAGTAGEICLRAARSGPFAGVYTPMLGYWNRAEATRNTIRNGWLRTGDIGHLAEDGDLF
VHDRRSDVIIRGGANVYPAEIERVLRTVPGVSDCAVIGLPDQRLGQSIAAVIEAAPAQGE
DALIAELDARCEEEVARYKRPVAWRVVESLPRNAGGKIVKAELRNLFG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgccgattggcttgttccgccggaaacgcggctatccatgccgggcgcgccc
gcgagcgtggcacggatgatagacgggccggccagggaaacccctgacaagatcgcgctg
attggccgtcacgccagactgagctacgccgaacttgaccaaaaggcggacgcggcggtc
gcattgctgatcgaactgggggtgaagcctggcgaccgcgttgccgcgacggcggccaat
ggggcggatttgatcaccgccttcctcgcctgtcagcggattggcgccatctgggtaggc
atcaaccgcaactatgccccggcggaaaagcgctattttctggaggattccggcgcatcg
ctctatctgggagaccgggatgcgatcgcgcagacggccgctgccggtatcgtcgccctg
gagatggagccgggcgatgaacagtgcgcctgggcccaagcccttgcgcgccacgcggga
cacacacggcctgctgtcggtctcgatccgtgggcgccggcggccatcgcctataccagc
ggaacgaccggccgtcccaagggcgcggtgcacagccagcataatatgatcgtcgccgcg
accatgtcgcaggtcatgtctcaggacgattcggaccaggtggtgcgcggcatgacatcg
cccatgaccattctcaacatgatgatcctgggagctatcgcgaccctgtcgcggggcgac
cgtctggtgtgcatggaccgcaccgatagccgcggcgtcgccgactggatccgggaagag
cggatcaccaccacaaacctggttccgacgatcgtgtacgatctgctcacccggccggac
atcccggccgaggatctcgcttccctgcgttggctcgtcgtcggcggcgccatggtgccc
gaaggattgccccgcctctacgaggaacggttcggcacgcggatgacgactggctacggg
cagacagagctgcccacgaccatctcgagaacgcatgaatactcggcaaccgtacagggg
gcggtcgggcgacctctgccgcatcttgaagtcgcgatccgtgatgaagatgattgcgag
cttcctgcggggacggccggggaaatttgcctgcgcgccgcgcggagcggccccttcgcc
ggcgtgtacacgccgatgcttggctattggaaccgggcggaagcgacgcgcaacacgatc
cgcaacggctggctgcgcacgggcgatatcgggcatctggccgaagacggcgaccttttc
gtccacgaccggcgaagcgacgtcatcatccgtggcggggctaacgtctatccggccgag
atagagcgcgttctgcggaccgttccgggcgtgtccgattgcgccgtgatcggcctgccg
gatcagcggctgggccagtcgatcgcggcggtgatcgaggcggcgcccgcacagggtgaa
gatgccctgatcgcggagttggacgcccggtgcgaagaggaagtcgcccgttacaagcgt
ccggtggcgtggcgcgtcgtggaaagccttccccgcaatgccgggggcaagatcgtgaag
gccgaattgcgaaacctgtttggttag
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