Sphingobium sp. TKS: K426_23904
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Entry
K426_23904 CDS
T04965
Name
(GenBank) NAD-binding 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00071
Fatty acid degradation
spht00280
Valine, leucine and isoleucine degradation
spht00310
Lysine degradation
spht00362
Benzoate degradation
spht00380
Tryptophan metabolism
spht00410
beta-Alanine metabolism
spht00640
Propanoate metabolism
spht00650
Butanoate metabolism
spht00907
Pinene, camphor and geraniol degradation
spht00930
Caprolactam degradation
spht01100
Metabolic pathways
spht01110
Biosynthesis of secondary metabolites
spht01120
Microbial metabolism in diverse environments
spht01200
Carbon metabolism
spht01212
Fatty acid metabolism
Module
spht_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K426_23904
00650 Butanoate metabolism
K426_23904
09103 Lipid metabolism
00071 Fatty acid degradation
K426_23904
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K426_23904
00310 Lysine degradation
K426_23904
00380 Tryptophan metabolism
K426_23904
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K426_23904
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K426_23904
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K426_23904
00930 Caprolactam degradation
K426_23904
Enzymes [BR:
spht01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K426_23904
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K426_23904
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K426_23904
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
F420_oxidored
2-Hacid_dh_C
DUF2680
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
UDPG_MGDP_dh_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AMK25684
LinkDB
All DBs
Position
2:complement(667811..669970)
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AA seq
719 aa
AA seq
DB search
MRLEKAEDGFAILTLDAEGSMNVVNDAFIADMEAATKQIAEDDSIKGVILTSGKKTFMAG
ADLKQLVNGFGTLTPQEAYAFSKRATDMHRAIEQSGKPWVAAINGLSLGGGFELALACHR
RILVDDAKAQVGLPEVNVGLLPGSGGTVRLGIIAGMKTALDLLLSGRSVGPQEALKLKIV
DEIVPADRLIDTAKSWLATGPDPVKPWDVKGWTPPQKKGLTVPEDSGAYMMYTGGLAKVG
YNQPAPAAILNSVFHGMQLPFDKALAVEGKYFAKLLTDPVARNIIRTTFISKQAAEKGAR
RPEGFPKFEARKIGVLGAGMMGAGIAFVSANAGIEVVLIDRDVPTAQKGKDYSAKVLGKL
VEKGKLTQDKADAVLARITPTDDFALLDGCDMVVEAVFEDTAIKAETTKKAEAVLPTQAI
FASNTSTLPISQLAQASRSPDQFIGLHFFSPVDRMGLVEVIMGKQTSKETLAKGLDFIAQ
LRKTPIVVNDSRGFYTSRVFQMLIHEGAAMLAEGVPPAVIENAAKAVGMPVGPLALLDEL
TLDLPLKIVDQAIAEEGEKYTPPAGVPVMRRMKDEIGRSGRKTGGAFYDYPEGGKKHLWK
GLAEHFPVKDGWDVEELKTRYLYAQAMETARCLEENVLETPQDADLGAIYGWGFPSWTGG
TISYIDTVGIEAFVKESDRLAQLYGPRFLPSAWLRDKAAKAEPFYASAKGATAKEPIPA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggaaaaggccgaggacggctttgcgatcctgaccctcgacgccgaaggctcg
atgaacgtcgtcaacgatgctttcatcgccgacatggaagcggcgaccaagcagattgcc
gaggacgacagcatcaagggcgtcatcctgacgtccggcaagaagacgttcatggccggt
gcggacctcaagcaactggtgaacgggttcggcacgctgacgccgcaggaagcctatgcc
ttttcaaagcgcgcgaccgacatgcaccgcgccatcgagcaatcaggcaagccctgggtg
gcggcgatcaacggcctgtcgctgggcggtgggttcgagctggcgttggcttgccaccgc
cgcatcctggtggatgatgccaaggcgcaggtcggcctgcccgaagtcaatgtcggcctg
ctgcccggatcgggcggtacggtgcggctcggcatcatcgcgggcatgaagaccgcgctc
gacctgctgctgtcggggcgctcggtcggtccgcaggaagcgctcaagctcaagatcgtg
gatgagattgtccccgccgacaggctgatcgacacggccaagagctggctcgccaccggc
ccggatccggtcaagccctgggacgtcaaggggtggacgccgccgcagaaaaagggcctg
accgtgcccgaggattccggcgcatacatgatgtataccggcggtctcgccaaggtgggt
tataaccaacccgcgccggccgcgatcctgaactcggtgttccacggaatgcaactgccc
ttcgacaaggcgctcgcggtcgagggcaaatatttcgccaagctgctgaccgatccggtc
gcacgcaacatcatccgcaccactttcatttcgaagcaggcggccgaaaagggcgcgcgt
cgccctgaaggcttccccaagttcgaagccaggaagattggcgtgctgggcgcgggcatg
atgggggcaggcatagcgttcgtgtcggccaatgcgggcatcgaggtcgtgctgatcgac
cgcgacgtcccgacggcgcagaagggcaaggactattcggccaaggtgctgggcaagctg
gtcgaaaagggcaagctgacgcaggacaaggcggacgccgttctcgcccgcatcaccccg
accgacgatttcgcgctgctcgatggctgcgacatggtggtcgaagccgtgttcgaggat
acggcgatcaaggccgaaaccacgaagaaggctgaagcggtgctgccgacgcaggccatt
ttcgcgtccaacacctcgaccctgccgatctcgcagctcgcccaggcgtcgcggagcccc
gaccagttcatcggtctgcacttcttctcgccggtcgaccgcatgggtctggtcgaagtc
atcatgggcaagcagaccagcaaggaaacgctggccaaggggctcgacttcatcgcgcag
ctgcgcaagacgccgatcgtcgtcaatgacagccgtggcttctacacgagccgcgtcttc
cagatgctgatccacgaaggcgcagccatgctggcggaaggcgtgccgccggcggtgatc
gaaaatgccgccaaggcggtcggaatgccggtcggcccgctggcgctgctggacgaactt
accctcgatctgccgctcaagatcgtggatcaggcgatcgccgaggaaggtgagaaatat
acgccgccggcgggcgtccccgtgatgcgccggatgaaggacgagatcggtcggtcgggg
cgcaagaccggcggcgccttttacgactatcccgagggcggcaagaagcatctctggaag
gggctggccgaacatttcccggtcaaggacggctgggatgtcgaggagctcaagacgcgc
tacctctacgcccaggcaatggaaacggcgcgctgtcttgaggaaaatgtgctggagacg
ccgcaggatgccgacctgggcgccatttatggttggggtttcccgagctggaccggcggc
acgatcagttacatcgatacggtggggatcgaagccttcgtcaaggaatccgaccgtctc
gcccagctctatggcccgcgcttcctgccgtcggcatggctgcgcgacaaggcggcgaaa
gccgaacccttttatgcgtccgccaagggcgcgacggccaaggagccgatcccggcatga
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