KEGG   Sphingobium sp. TKS: K426_25800
Entry
K426_25800        CDS       T04965                                 
Name
(GenBank) Type-IV secretion system protein TraC
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
spht  Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:spht00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spht02044]
    K426_25800
Secretion system [BR:spht02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   K426_25800
SSDB
Motif
Pfam: DUF5934 TraC_F_IV P-loop_TraG AAA_10 DUF87 T4SS-DNA_transf TrwB_AAD_bind FtsK_SpoIIIE AAA_16 nSTAND3 Fer4_NifH AAA_22 CbiA TraG-D_C MeaB Mg_chelatase RNA_helicase
Other DBs
NCBI-ProteinID: AMK26060
UniProt: A0A126RUZ9
LinkDB
Position
pTK1:80811..83402
AA seq 863 aa
MGASAMFDGFLGRLLGDLKQAEAKRPELGVPMLAHWLPYRSYDPASGIFYNSASRGFVLE
AAPMIGADERSGEILAQLLSEAIPTPGCLQIHQWMSPRVSELLSRWYVPRYLARGIYERI
AKHRVAHMTDGVWSSLSADAPFSLRNHRVALSYSTPESSRVSNEEIMTVRDGLISALASI
NVGARAMDPQALIAWIDDITSPTTAPGDDAVSYSAFDSIADQAIRRDMELRVEAGRLLLR
TERFRPTGREIDGTPEIGDIHPDRFEIRSFSVRNLPERWAPWDMARLIGDMFADKLRMPC
PVSTNLCIDFPDAEAASSKAGFKYMRTTSLADSKSARFLPQLKEQSREWRHVNDEMKQGR
KLVRVFHSVTAFSPLGKGDAHERALKSVYRAAGWDLLADRYLQIMGLLCAMPMTMANGLS
KDLERMKRMRTMLTTTAANLAPLQGEYLGGPIPHLLLIGRRGQPFFWSPFENSAGNHNVA
VFGKSGSGKSVALQELCASLCGAGAQVVVIDDGRSFEHSVKLQGGAFVEFTMSSGFCLNP
FSMIDAEQAGRDEDYLLDCMAMLKAIVNQMARHIDRLNDTERGLIDGAVNRVWEEKGRAG
SIDDVIAALEETGNQMAADLGIAMLPFSTRGTYGRFFRGEVSFELSAGLTVFELSDLSAR
EELRSVVLTAIMFLSQQMMRRVDRAVPKALLLDEAWQMLRGGAMADFIETYARTCRKYGA
ALVTATQSLNDYYKSAGSIAALENSDWFVILQQKAETIADFKKHDRFEMDDYTDALLRSL
KRNGFEYSDVMIKGPETLAVGRLVLDPFSAALFSSSPATFAAIEDLVARGLGMEQAIERV
AFPQNPEKWSNDPQAGSSPLAAE
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgggtgcgagcgcgatgttcgatgggttcctcggcaggcttctgggcgatctgaagcag
gctgaggcgaagcggccggagcttggcgtgccgatgctggcgcattggcttccctatcgc
agctacgacccggcaagtggcattttctacaacagcgcctcgcgcggtttcgtgcttgag
gcggcgcccatgatcggcgccgacgaacgcagcggcgaaatcctcgcccaactgctctcc
gaggcaattcctacgcccggctgcctccagatccaccagtggatgagtccgcgcgtgagc
gagcttctctcgcgatggtatgtgccgcgttatctggcgcggggcatctatgagcgcatc
gccaagcaccgcgtcgcccacatgaccgatggtgtctggtcctcgctatcggctgacgcg
cccttctcgctgcgcaaccatcgggtcgcactctcctattcgacgcccgagagttcacgc
gtctccaatgaggagatcatgacggtgagggacggcctcatttccgcgctggcctcgatc
aatgtcggcgcccgcgcaatggacccgcaggcgcttatcgcctggatcgatgacatcacc
tcgccgacgaccgcgcccggggacgacgcggtgagctacagcgcgtttgacagcatcgct
gaccaggcgatccgccgcgacatggagctgcgcgtcgaggcaggccggttgttgctgcgg
accgagcgtttccgacccacgggccgcgagatcgacggcacgccggagattggcgatatt
catcccgaccgttttgagatccggtccttttcggtgcgcaatcttcccgagcgctgggcg
ccctgggacatggcccggctgataggcgacatgttcgccgacaagctgcgcatgccctgt
ccggtctcgaccaatctttgcatcgactttcccgatgcggaggccgcgagcagcaaggcg
ggcttcaaatatatgcgaaccacgagccttgccgacagcaaatcggcccggttcctgccc
cagctcaaggagcaaagccgggaatggcggcatgtaaacgacgagatgaagcaggggcgc
aagctcgtgcgtgtcttccattcggtgaccgccttctcgcctctgggcaaaggcgatgcc
catgagcgtgcgctgaaatctgtctaccgggccgcgggctgggacctgctcgccgatcgc
tatctccagatcatgggactgctctgcgccatgcccatgaccatggccaatggcctgtcg
aaggacctggagcgcatgaagcgcatgcgcaccatgctgacgacaacggcggccaatctg
gcgccgctccagggcgaatatctgggcggcccgatcccgcatctgctgctgatcggccgc
cgggggcagcctttcttctggagcccgtttgaaaacagtgcgggcaaccacaatgtcgcg
gtgttcggaaaatcaggctcgggcaagtccgtggcgctccaggagctgtgtgcctcgctg
tgcggcgcgggggcccaggtcgtggtgatcgacgacgggcgctccttcgagcattcggtc
aagctccagggcggcgcctttgtcgagttcaccatgtcctcgggtttctgcctcaacccc
ttcagcatgatcgacgcggagcaagcggggcgggacgaggattatctgctcgactgcatg
gcgatgctcaaagccatcgtcaatcagatggcgcggcatatcgacaggctcaatgacacc
gagcgcgggctgatcgacggcgcggtcaaccgcgtctgggaggaaaaaggccgcgccggc
tcgatcgacgatgtcatcgcggcgctcgaggagaccggcaaccagatggcggcagacctc
gggatcgcgatgctgcccttttccacgcgaggcacatatgggcgattcttcaggggtgag
gtgtcgtttgagctctcggccggcctcacggtcttcgagctctcggatctctccgcgcgc
gaggaactgcgcagcgtggtcctgaccgcgatcatgttcctctcgcagcagatgatgcgc
agggtcgaccgggccgtgcccaaggcgctgctgctcgatgaagcgtggcagatgctgcgc
ggtggagctatggccgacttcatcgagacctatgcgcgcacctgccgcaaatatggcgct
gcgctcgtcacggcgacccagtcgttgaacgattattacaagtcggcaggatcgatcgcc
gcgctcgaaaatagcgactggttcgtgattctgcagcagaaggcggaaacgatcgcagac
ttcaagaagcacgaccgtttcgagatggacgattatacagacgctttgctgcgctcgttg
aaacgcaacggctttgaatattccgatgtcatgatcaaggggccggaaactcttgctgtc
ggccgactggtccttgatcctttttcagcggctctcttctcgtccagtccagcgaccttt
gcggcgatcgaggatctggtcgcacggggtctaggcatggaacaggcgatagagcgcgtc
gcctttccgcaaaatcctgaaaaatggtcgaacgatccgcaagcgggctcgtctcccctg
gccgcggagtag

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