Sphingobium sp. TKS: K426_26390
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Entry
K426_26390 CDS
T04965
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spht03032
]
K426_26390
03036 Chromosome and associated proteins [BR:
spht03036
]
K426_26390
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_26390
DNA replication proteins [BR:
spht03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K426_26390
Chromosome and associated proteins [BR:
spht03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K426_26390
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K426_26390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AMK26177
UniProt:
A0A126RVK5
LinkDB
All DBs
Position
pTK1:complement(211957..212250)
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AA seq
97 aa
AA seq
DB search
MIRSELIQKMLEEHPDLSASEVESIVNLFFQEIIDNLAKGGRVEIRGFGTFTPRPRMARM
GRNPRTGECVPVAEKNAVHFRPGKRMRERLRAQGSGD
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatctgagctgatccagaagatgctcgaagagcatcccgatctctccgcttcg
gaagtcgagagcatcgtcaatcttttcttccaggaaatcatcgacaatctcgcaaagggc
ggacgggtcgagattcgcggctttggtacctttaccccacggcctcgcatggcccggatg
gggcgcaatccccggactggagaatgcgtcccggtggccgaaaaaaatgccgtgcatttc
aggccgggcaagcggatgcgtgagcggcttcgcgcgcaggggtcaggggattag
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