Sphingobium sp. TKS: K426_26530
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Entry
K426_26530 CDS
T04965
Name
(GenBank) lytic transglycosylase catalytic subunit
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spht01011
]
K426_26530
Enzymes [BR:
spht01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
K426_26530
Peptidoglycan biosynthesis and degradation proteins [BR:
spht01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
K426_26530
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Gene cluster
GFIT
Motif
Pfam:
SLT
HEAT_Nup120
Motif
Other DBs
NCBI-ProteinID:
AMK26205
UniProt:
A0A126RX20
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All DBs
Position
pTK1:complement(239644..241683)
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AA seq
679 aa
AA seq
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MPTMITLLSLALAVSATKDIPRSSQGRSSDAGGVAQPGRGGADPSPWQRAKGRIGVASDP
AIVRTISQWRALLRSDALGFSAYAGFIMANPGWPGESRMRRLAESSINPDSYDPDKVIAF
FTRFPPRTATGNARLAFALMQEGRMDEARRAAHDAWIGGTLSRGDEAELLASFGARWTGL
DHDRRADVLLWKGDVAGARRMLPYVLSSRRPIYEARIALRQKIADAAAKMHRAQAAGASD
AGFVADKATWMRKTGDRIGARQYLANRPALAVRPGDAEKWYELLLAEARAAAKESQWSFA
YGIASKLDDAYAPGTDVSDRPIGERDDYTSLAWLAGSTAFYKLNKPRAAMEMFRRYATAA
KSPQTRSKGFYWAGRAALQAGKAGDAKRYFARAAVFPRQFYGQLALERLGRPIPAPAPAR
RQASISSAERSAFASRSVVRAVKALGQMGYWKEQSQFARAIANHAASDAEHHLAAELAQN
IGRPDMGVMVGRRALSSGLAGYGKSAFPRVPVPAEARSSWTMVHAIARQESQFDRSIVSH
AGARGLMQLMPGTAREQAGKLGLRYNPGSLDDPGYNIRLGASYIERMLSYYRGSYPLAVA
AYNAGPGNVNRWLRANGDPRAPGADMLRWIEEIPLYETRNYVQRVLENAVTYDLMNPERA
PFRGSDTPLSKYLGKEAKG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccatgatcaccctcttgtcgctggcccttgcggtcagtgcgacgaaggacatt
ccccgctcttcccagggcagatccagcgatgccggcggcgttgcgcagcccggacgaggc
ggcgcagaccccagtccatggcagcgggccaagggccggatcggggttgcaagcgatcct
gccatcgtccgcaccatcagccaatggcgcgcgcttttgcgcagtgacgctctgggcttt
tcggcttatgccggcttcatcatggcgaaccctggctggcccggggagagccggatgcgc
cggctggcggaaagcagcatcaatcccgacagctatgatcccgataaggtcatcgccttc
ttcacccgcttcccgccgcgcaccgcgaccgggaacgcgcgccttgcctttgcgctcatg
caggagggccggatggacgaggcgcgcagagccgcgcacgatgcctggatcggcgggaca
ttgtcgagaggtgacgaggccgagctgctcgcctccttcggcgcgcgctggacggggctg
gaccatgaccggcgcgccgacgtccttctctggaagggcgacgtcgcgggcgcgcggcgg
atgctgccctatgtcctttcctctcgtcgtcccatctatgaggcgcggatcgcgctgcgc
cagaagatagccgatgcggcagcgaagatgcaccgggcgcaagcggccggcgcaagcgat
gccggctttgtcgcggacaaggcgacctggatgcgaaagaccggcgaccggatcggggca
cgccagtatctcgccaatcgcccggcgctggccgttcggccgggtgacgcggaaaaatgg
tacgagctgctgttggccgaggcccgtgccgccgcgaaggagagccagtggagctttgcc
tatggcatagcgagcaagctggacgatgcctatgcgccagggacggacgtcagcgaccgg
ccgataggggagcgcgacgactataccagcctcgcctggcttgcaggctcgaccgctttc
tacaagctcaacaaaccccgggcggccatggagatgtttcgtcgctacgccacggccgcc
aagtcgccccagacccggtcgaagggcttctactgggctggccgcgcggcgctccaggcg
ggtaaggcgggcgatgccaagcgctatttcgcgcgtgccgcggttttcccgcgccaattt
tacggccagctcgcgctggaacggctgggtcgcccgatccccgcgcccgcccctgccagg
cgccaggcttcgatatcctccgccgagcgctccgcgttcgccagccgctcggtcgttcgc
gcggtgaaggcgcttgggcagatgggttattggaaggagcagagccagtttgcccgcgcc
atcgcaaaccacgccgccagcgatgccgaacatcatctcgccgccgaactcgcacagaat
atcggccgcccggacatgggcgtcatggtcggccggcgcgcgctctcgagcggtctggcg
ggctatgggaaaagcgcctttccgcgcgtacctgttcccgctgaagcacgatccagctgg
accatggtgcatgccatcgcgcggcaggaaagccagttcgacaggagcatcgtcagccat
gcgggcgcgcggggcctgatgcagctgatgcccggtaccgcccgcgaacaggccgggaag
ctgggattgcgctataatcctggatcgctcgatgaccccggctacaatatcaggctcgga
gcatcctatattgagcggatgctctcttattatcgcggcagctatcccctcgctgtcgcg
gcctataatgcgggaccgggcaatgtgaaccgctggcttcgcgccaatggcgacccaagg
gcgccaggcgccgacatgctgcgctggatcgaggagatccccctctacgaaacgcgcaac
tatgtgcagcgcgtactggaaaatgctgtaacctatgatctgatgaaccctgagcgcgca
ccttttcgcggctccgacacaccgctttccaaatatctgggcaaggaggcaaaaggctga
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