Sphingobium sp. TKS: K426_28085
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Entry
K426_28085 CDS
T04965
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spht03032
]
K426_28085
03036 Chromosome and associated proteins [BR:
spht03036
]
K426_28085
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_28085
DNA replication proteins [BR:
spht03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K426_28085
Chromosome and associated proteins [BR:
spht03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K426_28085
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K426_28085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AMK26516
UniProt:
A0A126RWY3
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All DBs
Position
pTK2:77854..78147
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AA seq
97 aa
AA seq
DB search
MIRSDLTTKVAGENPALPPEVVEKIVDLFFEQIVDSLSTGGRVELRRFGSSTTRAREARI
GRNPSTGEEVAVTAKRVPFFKPGKEMRERLKAEKATA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgttcggatttgacgacaaaagtggctggggaaaatccggcgctcccgccggag
gtcgtcgagaagattgtcgatctctttttcgagcagattgtggacagcttatcgacgggt
ggccgggtcgaactgcgtagatttggttcatccacgacccgagcgcgggaagcgcgcatc
ggacgaaacccttcgacgggcgaagaggtcgccgtgacggcgaagcgcgtgccatttttc
aagcccggcaaagaaatgcgcgagaggctgaaagccgagaaagcgactgcctga
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