Sphingobium sp. TKS: K426_28295
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Entry
K426_28295 CDS
T04965
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spht02000
]
K426_28295
Transporters [BR:
spht02000
]
Other transporters
Pores ion channels [TC:
1
]
K426_28295
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AMK26554
LinkDB
All DBs
Position
pTK2:122053..124392
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AA seq
779 aa
AA seq
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MAASLLCGTSALAQVTDSKPVGASNFDAAAQRDEGGGLTEIIVTAQHRIERRQDVPVSVQ
VIEGGDLAQHNLTSLGTVSLKVPSVQVGFGSSRGANLYIRGIGSGSNQSFDQSVGIYTDD
VYHGRSRTSAGTFLDLERMEILKGPQSTFFGNNSIAGAFNIVTKKPDDVFGGWARALISP
NGDSGGQFALEGAVNSRITDTLNVRVAGTFNGQRGWLENIVTGKFVPRERNAAGRLTLAF
APSDLFDATLKLEVSNSKSTGGLISQTDNCPPPAPFTPRGFCAISLSLGLPNIDTNKYSV
NDGGYGEFNNKEAVLNINYHIGDHVLTAVTAYYKSKYYLQYDGDGTPVHLLNLQNPEVYD
QFSQEIRLTSPDGNSLEYIVGAYFQSDQLFYETDLNFGNLSSTITSSPALAALVPFLPIG
QVSKSTQNERILSAFGSLTWKVTDKLRLTGGGRISHVRKSFVWDEFYAAAPVPFGVFTPL
PANLNSLPSILGIGSVGSVNLSRSDNAFMPSAKLQYHFSRDVMAYASYSRGFKAGGFNGA
DNTAIAANFPFNPEHVNSYEVGLKSELFDRHVLFNLAAFRSDYSDLQVSINQFLPNGVGF
TIVRNAARSRSQGVELESKFIVSPWLSLEVAGSYLDTKYVSYPNASPTDLQKFNGLTFQD
LSGHRTPFAPKWSGSATALFTAPLPGGYKAITEVEGLFATGYDTRGNDDPLLREDGYVRL
DARLGFEDASGKWAFDIIGKNLTNAQIITFAAQYPSSLGSRSASKQQPRNVAFQVRYKW
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctctgctttgtgggacaagcgcgctcgctcaggtgacagattccaagccg
gtcggcgcatcaaattttgacgcagccgcgcagcgagatgaaggcggcggattgaccgaa
atcatcgttaccgcacaacatcgcatcgaaaggcgccaggatgttcccgtctcggtacaa
gttatcgaaggcggcgaccttgctcagcacaatctgacttcgcttggaacggtgagtctc
aaagtgccatccgttcaagttgggttcgggagttcgcgcggcgcaaatctctacattcgc
ggaatcggatcgggatccaatcagtcttttgatcagtctgtcggtatttatactgacgac
gtctatcatgggcgctcgcggacatctgcgggtacgttcctggacttggaacggatggaa
attctcaaaggtccgcaatcgaccttttttggaaataactcgatcgccggcgcatttaat
atcgtgacaaaaaagccagacgacgtcttcggcggatgggcaagagctctaatttctccc
aacggagacagcggcggccaattcgctttggagggtgctgtcaatagtcggatcaccgac
actcttaatgttcgagttgcaggtacttttaatggccagcggggctggcttgaaaatata
gtcaccgggaagtttgtaccacgggagcggaatgcggcgggacggctgacgcttgctttc
gctccgtccgacttgttcgatgcgactttgaagctggaagtcagcaacagcaaatcaacc
ggcggtcttatttctcagactgataattgcccgccaccggcaccgtttactccaagagga
ttctgcgcgatttctctttctcttggccttccaaatatagacaccaataagtatagtgta
aatgatggcgggtatggtgagtttaataataaggaggccgtgttaaatataaattatcac
attggcgatcatgttttgacggctgtgacggcctattacaaatcaaaatactacctgcag
tatgatggtgatggaactccggttcatcttcttaacctacaaaatcctgaggtatacgac
caattcagtcaggaaattcggctgacgtcaccggatggcaattcacttgaatatattgtg
ggggcatactttcagtctgaccagttattttatgagacggatttgaattttggcaacctg
tcttcgacgatcacctccagtcccgccttagcggctttggtccctttcttgccgattggc
caggtctccaaatcaactcagaatgagcgaatcttgtctgcgtttggatctctcacctgg
aaggtgacggataaactgcgattgacaggcggcgggcgcatcagccacgttcggaagtcc
ttcgtttgggacgaattttacgcagcagctcctgttccattcggagtatttacaccgctt
cccgcgaatctaaattccctgccgagcatcttaggaattggaagtgttggttcggtgaat
ctgagccgcagcgacaatgcgtttatgccttcagcaaagcttcaataccatttttccaga
gacgtcatggcatatgcatcctattctcgaggcttcaaggccggcggtttcaatggggcg
gataacacggcgatcgcggcgaatttccccttcaatccggaacacgtaaactcgtacgaa
gttggcctcaaaagcgagctgttcgatcgccacgtgcttttcaaccttgcggcgttcaga
tctgattattccgacttgcaggtttcaataaatcagtttctgcctaatggcgtagggttt
acaattgtcagaaatgccgcgcgatcacggagtcagggtgtagagcttgagagcaaattc
atcgtatctccctggctgagtcttgaggtggcgggaagctatctagacacgaagtatgtg
agctatcccaatgcatctccaaccgaccttcaaaagttcaacggtctgacctttcaggat
ttgtcgggtcacaggacgccatttgcgccaaagtggagtgggtctgccacggccctgttt
accgcacctttgccgggtgggtacaaggcgatcacggaagttgaaggacttttcgccacg
ggctatgatacccggggaaatgacgatccgttgcttcgtgaagatggctatgtgcgactc
gacgcgcgcttggggtttgaggacgcatctggaaaatgggcattcgatattatcggaaag
aatcttaccaatgcccagatcataacttttgccgcgcaatatcccagttctctggggagt
cgctcagcttccaagcaacagccccgcaatgttgccttccaggtccgctacaaatggtga
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