Sphingobium sp. TKS: K426_29045
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Entry
K426_29045 CDS
T04965
Name
(GenBank) outer membrane autotransporter barrel
Organism
spht
Sphingobium sp. TKS
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AMK26704
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Position
pTK3:complement(69104..73477)
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AA seq
1457 aa
AA seq
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MQQSPANSFKGTNNGLIAGGLRTVGFGGDASITNGGEIYNGITASGQGNVSITTSAAGAV
RSGNVVASSITVDTAAAPVDGVTKTSFAGGKASIVQAGDAADAEDSVRGNLNATGLNGAE
VTVSAKARNVIASAGGVTETVGGSNAVTSGTVTTTTVRNDVTRGGGSANVTVGGDGDVAL
VSATGIGGASATIDGAVAGNVNASSNGTSTTYTDISVVDGAVPVSGSTKTTSTAVGKAAD
VSVGEDGSVGGSVSVNGQGSASTVIDGTVDGNVSLTSTATNNAYDYASTPTGYTYSDTNV
GAGGAATGAVGATGTVDGNFTAIGDNSVVLNNAGTIKGNVTGTSRRSLTNSSGKVGSSTT
TSATLIETTSQSESTSRSATTTGTASFVNEVGGQVQGNVSLSAGGDVTYNNDGVVFGSTS
LVSQGTDNATTSSNTTKVSTAIATPPALDVVTTSVEDKSTTVTTHTGGNVTGTYANANGT
LNFGVNGNGSVNQLADQASSATVSGVIYGSLTSQAGSANSQSNSESKSVEVLSGGNGTRS
LTSASSSSSTTNAGGDSSVTVSGKLAEGEAGVVPSLSSYATGNSGVTLSGTVEGGIYSSA
SGTDVSSASTQTASQTITSSVARTDSLARTDDYGDNSVGGASTVDVAATGKAATLSGNVN
AYGQTGASVTVAKGGVVGSSADNPFGGVYANADGTDYTTKQERSFTRVPAEGTATASDKY
TSSYATSADVGDATVAVAGTVAGNAESSTTRGKATTTVTGTIGGDAVATAAYGNDYQSSS
TTDYAGKVAASGSTSFGSLVPKVSKQVSSSTSNNVGGAASILVDTASDLQKADKIGVSGS
VYATGLSSATATIANGSKVNGNVEAYSHFTNSASEATTLYNSAGEATENSASYATTLAGG
DANVAVGTKSEIGGSVYADGDKTATVSNAGMIEGSVIADTLHSVVSSTSKSTNLNNVGLR
QDETTNAYTGIGGAATVTNAAGALIGGDVYVAGATGILTNGGGIAGTVVLGQSIDNHSQT
QIDTVTTTTQTVTPAEALTAQTYTFDQNNFLGGGVYVGDATITDPFGRDDAPDIKTSDVK
ATVNLNAGSVTLGNIVGQRDAETGAFLTDTVLNLNGSGFLGADVLNLKTPTSPTYTPEAV
LPKEAQELGFGTYSTGAVRILGVNSVNKADAGTFVLDLAPYIEDSVDLNRWSADVGSINV
SAGELQITGPAYDPTDADGAYIGIQGNIVVDGGSLVFGRRTLIDGALVGGSITSAGVETI
SGVHVVLNGDYSQSDTGTTVVGVSPSLVRFAPVSVGTANGGSEVLGPIEAGATVPFFTTP
ANGFSAQSTPSRIDVTGKVTLSGKVLVDVTKDAIYSAGDGYTLFTYGDTDSAVSATVNQS
ISSPFVSFDLQKDDATKTVKIVAKRVGYATAATNPNAVSAANALDALIPTIVQKISDDAN
GGSVFTGSFAGGGEILR
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacagagcccagcgaacagcttcaaaggcaccaataacggcctgatcgctggtggg
ctgcgcaccgttggcttcggcggcgatgcctccatcactaatggcggcgaaatctataac
ggcatcacggcatcgggtcagggcaatgtgtcgatcacgacatcggctgcgggcgcggtg
cggtcgggtaatgtcgtggcaagctcgatcacggtggataccgccgctgcgccagttgat
ggcgttacaaagaccagctttgctggtgggaaagccagcattgtgcaggccggcgatgcg
gcggatgctgaagacagcgtacgcggcaatctgaacgcgaccggcctgaatggcgcggaa
gtgaccgtttccgccaaggcgcgcaatgtcatcgcgtcggccggcggcgtgaccgaaacg
gtgggcggcagcaatgcagtgaccagcggcactgtaaccaccaccaccgtccgcaacgac
gtcacgcgcgggggcggatcggccaatgtaactgtcggcggtgacggcgatgtggccctt
gtcagcgcgaccggcatcgggggtgccagcgcaaccattgatggtgcggttgcgggcaat
gtgaatgccagttcgaacggcacttctaccacctacacggatatcagcgtcgtcgatggc
gccgtcccggtcagcggttcaacaaaaaccaccagcactgccgttggcaaagccgccgac
gtttctgtcggcgaagatggcagcgtcggaggttcggtcagcgtaaatggccaaggcagc
gcatcgacagtgatcgacggcacggttgacgggaatgtcagtcttacttcgactgctaca
aataatgcctatgattatgcttcgacccccacgggctacacctatagcgacactaatgtt
ggggcgggcggcgccgctaccggcgcggtcggcgcgaccgggacggtcgatggcaacttc
acagccatcggggacaatagcgtcgttctgaacaatgccgggacgatcaagggcaatgtc
acaggcacgtcgcgccggtctctgacaaattccagcggcaaggtcggcagtagcaccacg
accagcgctacgctgatcgagacaaccagccagagcgaatcgacctcacgcagcgcaacc
accactggcaccgccagcttcgtcaacgaagttggtgggcaagtgcagggcaatgtctcg
ctgagcgcgggtggtgacgtgacttacaacaacgacggtgttgtattcggttcgaccagc
ttggtcagtcaaggcacggacaacgcgacgaccagcagcaacacgaccaaggtttcgacc
gcgatcgcgacgccgcccgcgctggatgtcgtaacgacctctgtcgaagacaaatccacg
accgtcacgacacacaccggcggcaatgtcaccggcacttatgccaatgccaacggcacg
ctgaatttcggcgtcaacggcaatggatcggtaaaccaactcgccgaccaggcgagcagc
gcgaccgtttccggcgtaatttatggtagcctgacgtcgcaagccggctcggcgaacagc
cagtcgaacagcgaaagcaaatcggttgaggttttgtcgggcggcaacggcacgcgcagc
ctgaccagcgcgtccagttcttcgtccaccaccaatgcaggtggcgacagcagcgtcacc
gtcagcggcaagctggctgagggcgaggccggagtagtgccttcgctgtcctcctatgcc
accggcaacagcggtgtcaccctttcgggcaccgtcgaaggcgggatatattcgagcgca
tcgggtactgatgtcagcagtgcttccacccagacggcatcgcagacgatcacgtccagc
gtagcgcgcacagacagtctggcgcgaactgatgactacggcgacaattcggtcggcggt
gcctccaccgtcgatgttgcggccacgggcaaggccgccacgctgtctggcaatgtcaat
gcctatggccaaacgggcgcaagcgtcacggttgccaagggcggcgtggtcggcagcagc
gctgacaatccttttggcggcgtttatgccaatgcggatggcactgactataccaccaaa
caggagcgaagcttcacgcgcgttccggcggagggcacagcaacagcttccgacaaatac
acctccagctatgccaccagcgccgatgtaggtgatgcaactgtagcagtcgccggaacc
gtggctggcaacgcggaaagctccaccacgcgcggaaaggcgacgaccaccgtcaccggc
actatcggcggggacgctgtcgccacggcagcctatggcaacgactatcagtctagcagc
acgactgactatgcgggcaaggtagcggcttccggttcgaccagctttggttcgctggta
cccaaggtgtccaagcaagtgagcagttccaccagcaacaatgtcggcggcgcagcttcg
atcctggtcgatacggccagcgatctgcaaaaggctgacaagattggggtatccggttcg
gtctatgcaaccggcctctcctccgccacagcgacgattgccaatggttccaaagtaaat
ggcaacgttgaagcctacagccacttcaccaactcggccagcgaagcgaccacgctctac
aatagcgccggtgaagcaaccgaaaacagcgcgtcttacgccacaaccttggctggcggt
gacgctaatgtagcggtcggcaccaagagcgagatcggcggcagcgtctatgccgatggc
gacaagacggccacggtcagcaatgccggtatgatcgaggggtctgtcattgccgatacc
ctgcattcggtagtgtcatcgacctcgaagagcaccaacctcaacaatgtcggcctacgc
caggacgaaaccaccaatgcatataccggcatcggtggcgcggcgacggtcaccaacgcc
gcaggcgcgctgatcgggggcgatgtctatgtcgctggtgcgaccggcatccttaccaat
ggcggcggcattgcgggcacggtggtgttgggccaatcaatcgataatcacagccaaacc
caaatcgataccgtcaccaccaccacccagacggtcacgcctgccgaagcactgacagcg
caaacctatacgttcgaccagaataacttcctgggcggcggcgtctatgtcggcgatgcg
actattaccgaccccttcggtagggatgacgccccagacatcaagacgagtgacgtgaag
gcaacggtcaacctgaatgccgggtcggtcacactgggcaacatcgtcggccagcgtgac
gctgaaacgggtgcattcctgaccgatacggtcctgaacctcaacggatcgggtttcctg
ggggctgatgtcctcaacctcaaaaccccgacttcacccacctacactcccgaagcagtg
ctgccgaaggaagcacaggaacttggcttcggtacttatagcaccggtgcagtacgtatt
ctgggcgtcaacagcgtcaataaggccgatgcgggcactttcgttctcgatcttgccccc
tatattgaggattctgtagacctcaatcgctggagtgccgatgtcgggtcaatcaacgtt
agtgctggtgaattgcagatcacgggacctgcctatgacccaaccgacgcagatggtgcc
tatatcggtattcagggtaacattgtcgtcgatggcggctcactggtcttcggtcgccgg
acgttgatcgacggtgcccttgtcggaggcagcatcacctctgcaggcgtggaaacgatc
tctggcgtgcatgttgtactgaatggcgactatagccagtcggacacgggcacgactgtg
gtcggggtgagcccgtcactggtgcgtttcgctccggtgtcggtcggcacggccaatggc
ggcagcgaagtgcttgggccgatcgaagcaggggcgaccgtgcccttcttcaccacgccg
gccaatggcttctccgctcagtccaccccctcgcgtatcgacgtgacgggcaaggtcact
ctgagcggcaaggtgctggtcgatgtgactaaggatgcaatctattcggcgggagatggc
tatacgctgttcacctatggcgatacggacagcgctgtgagcgcgactgtcaaccagtcg
atcagttcaccctttgtaagcttcgatctgcagaaggatgacgcgaccaagaccgtcaag
atcgtcgccaaacgtgtcggttacgctactgcggcgactaaccccaatgccgtatcggcc
gccaatgcactggatgcgctgatcccaacgatcgtccagaagatcagtgacgacgccaat
ggcggatcggtattcacggggtcatttgcgggagggggcgaaatcctacgctaa
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