Sphingobium sp. TKS: K426_29380
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Entry
K426_29380 CDS
T04965
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spht02000
]
K426_29380
Transporters [BR:
spht02000
]
Other transporters
Pores ion channels [TC:
1
]
K426_29380
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AMK26766
LinkDB
All DBs
Position
pTK4:33913..36285
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AA seq
790 aa
AA seq
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MRAYLYCSVAGLLLAGGGAASAQDAPASAPAPNAATAQGANEIVVTANKREEKLNNVGLS
ITALSGNALAERKITSLQDVASAIPGLAYAQSATNTPILTLRGVGFNESSLGVYPAVSVY
VDQAPLPFPVLASHSAFDLQRIEVLKGPQGTLFGQNSTGGAINYIAAKPTRSFTAGGDIS
YGRFNEIDGNAYLSGPITENLRARIAVSGTHTDDWQRSNSRPYDTNGKVSYITGRAIVDW
DASDSVRFSLSLNAWRDTSDPQASQYIALRGQNPFVQQSSIDYPFSPQNPRAADWSTGIS
TPRSDRKFYQPALRADIDLTEAITLTSLTSYGHYTQRQTTDGDGMALAQGDLVRDDGRIT
TFNQEVRLANSSKSAFRWVLGANYERSRTYENQFLNFADSSQNNAGANFIDAGGVYNRQR
IRNYAIFGNAEYDLTSRLTLKGAVRYTNSHNHALTCTYDGGDGRVAQLLNLLGSLLGTVP
FTPIGINDCYALNQNNVPGTPYIGQLNQHNVSWRAGVDYHVGPTSLLYANVSRGYKAGSF
PVLATASQSSLNPVTQEQLTAYEAGAKLGLWDRKVQLNLAGFYYDYRNKQVRGKINDPLF
SVLDLLANVPKSRVLGFDGDVTINPLPGLSLTGSLTYLDSKVQRYSGYNAIGEVNNFAGD
RLPFTSKWNVGLNADYKARLDNGGAPFIGITMNARSSQDAVIGGGRIVIPPSPVNKVLPG
LIHPFEMKGYATFDARVGYEAPDGRWTVSLWGKNIFNKYYFTSVITFDDSISRFAARPAT
YGVTLGFKFD
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagagcttatctttactgtagcgtcgctgggctcctgctcgcgggcgggggtgccgct
tcggcgcaagacgcaccggcatcggcgcccgcgccgaacgctgcgaccgcgcagggcgca
aacgagatcgtggttaccgcgaataagcgcgaggaaaaactcaacaatgtcggcctgtcg
atcacagcgctatccggtaatgcgctggcggagcgtaagataacgtcgcttcaggacgtc
gcgtccgccatccctggccttgcctacgcgcaaagcgccaccaacacgccgatcctcaca
ttgcgtggcgtaggcttcaacgaaagctcgctcggcgtctacccggcggtcagcgtctac
gtcgaccaggcccctcttccgtttccggttctggcaagccattcggcgttcgatcttcag
cggatcgaggtcctgaaaggcccgcagggaaccttgttcggccagaactcaaccggcggt
gcgatcaactatatcgcggccaagccgacccgcagcttcacagcaggcggcgacatcagc
tacggccgcttcaacgaaattgacggcaatgcctatctgagcggcccgatcaccgagaac
ctgcgcgcccggatagctgttagcggcacacacaccgatgactggcagcgcagcaacagt
cgcccctacgacaccaacggaaaggtctcctatatcacagggcgcgccatcgtcgattgg
gatgcgtcggacagcgtgcggttctcgctcagcctgaatgcgtggcgtgatacatcggat
ccgcaagcctcccaatacatcgcacttcgcggccagaaccctttcgtgcagcaatcgtcg
atcgattatccgttctcgccacaaaatccccgagcagccgactggtcgacgggtatcagt
acgccgcgcagcgaccgcaaattctaccagcccgcgctccgcgcggacatcgatctcacc
gaagcgatcacgctgacgtcgctcacctcttacggccactacacccagcggcagacgacc
gatggtgatggcatggcgcttgcacaaggcgatctggtcagggacgatggccggatcacc
accttcaaccaggaagtgcgccttgccaactcgagcaagtcggcgttccgatgggttctc
ggcgccaactatgagcgcagccgcacttacgagaaccagttcctcaacttcgcagattcg
tcccagaacaatgccggtgccaatttcatcgatgcggggggcgtatacaatcgccagcgg
atcaggaactatgctatctttgggaacgctgaatatgacctgacgtccaggctgacgctg
aaaggcgcagttcggtataccaacagccacaatcacgcgctgacatgcacctacgacggt
ggggacggacgggtggcgcaactcctcaacctgctgggaagccttctcgggaccgtgccg
ttcacgccgatcggcatcaatgactgctacgcgctcaaccagaacaacgtcccggggacg
ccctatatcggccagctcaaccagcacaatgtgtcctggcgggccggtgtggactatcat
gtcgggcccacctcgttgctctatgcgaacgtgtctcgcgggtataaggcaggcagcttc
ccggtactcgctaccgcaagccagtcctcgctgaacccggtgacacaggagcaactcact
gcctacgaagccggcgcgaagctgggtctctgggatcgaaaggtgcagctcaacctggcc
ggcttctattatgattatcgtaacaagcaggtgcgcggaaagatcaacgatccattgttt
tccgtgctcgacctcctcgccaatgttcctaaatcgcgcgtccttggtttcgatggagat
gtgacgatcaaccccttgccgggccttagtctcacaggatccctcacctatctcgatagc
aaggtccaacgctattcgggttacaacgcgatcggagaggtcaacaatttcgcgggcgac
cggctgcccttcacgtcgaagtggaatgtcggcctcaatgccgactacaaggctcggctc
gacaatggcggagcgcccttcatcggaattacgatgaatgcgcgatcctcgcaggacgcg
gtaatcggcggcggacgcatcgtcatcccaccatcgccggtgaacaaggtacttccagga
ttgattcatcccttcgagatgaagggctacgccacgttcgacgcgcgggtgggatacgag
gcgccggatgggcgctggaccgtgtccctctggggcaagaatatcttcaacaaatattac
ttcaccagcgtgatcactttcgacgactcgatctcgcgatttgctgctcggccagcgacc
tatggagtcacgcttggcttcaagttcgattga
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