Sphingobium sp. TKS: K426_30110
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Entry
K426_30110 CDS
T04965
Name
(GenBank) conjugal transfer relaxase TraA
Organism
spht
Sphingobium sp. TKS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
AAA_19
TraI_hel_assoc_N
SH3_13
Viral_helicase1
PIF1
AAA_11
PhoH
AAA_22
Herpes_Helicase
Helicase_RecD
UvrD_C_2
DUF2442
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
AMK26913
UniProt:
A0A126RXJ5
LinkDB
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Position
pTK6:complement(25859..28990)
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AA seq
1043 aa
AA seq
DB search
MAIYHFSAKVISRANGSSAVASAAYRAAERLHDDRLGRDHDFSNKAGVVHSEIMLPEGTP
ERLNDRATLWNEVEAGEKRKDAQLAREVEFSIPRELDQKEGIRLARDFVEKQFVERGMVA
DMNVHWDLGKDGQSKPHAHVMLSMREVGLEGFGQKVREWNSTALLQEWREAWADHVNERL
AELDIDARIDHRSYEAQGIELEPQHKIGPAASRMPEQGLEAERVEDHARIARENGEKIIA
NPQIALDAITRQQATFTRRDLAQFAFRHSDGKDQFDQVMSAVRTSPELVALGKDGRGEDR
FTSREMIDTEQRLERAGYGLADRAGHGLPAASKMGGRDTAERVGLALGSQQKDALAHITG
KNDLAIVVGYAGTGKSTMLGVARDEWERAGYQVRGAALSGIAAEGLEGGSGIASRTIASM
EYQWEQGRELLGPRDVLVIDEAGMIGTRQMERVLSEAERAGAKVILVGDAEQLQAIEAGA
AFRSLAERYGAAEISDVRRQHEDWQKDATRALATGRTGEAIHAYAEHGMVHAAETREAAR
ESLVEGWDRARIADPDKTRIILTHTNAEVRDLNLAARDRLRDAGELGQDVRVSAERGARE
FATGDRIMFLKNDRGLGVKNGTLGKVERVSPDSMAVKLDDGRQVAFDLKDYAHVDHGYAA
TIHKSQGVTVDRAHVLATPGMDRHSAYVALSRHRDGVQLHYGRDDFADDRRLVRTLSRER
AKDMASDYPMYRDRDAEAQSFADRRGLSGEIRVADAPERKGVEILAPRAGTSRQMGEDSR
TPDIGGDRGAGEAKAAAERQSRRGMFDGLKLSAAPVKAAEPAQGAKEKPAPKRGMFDGLK
LPQRTPTPEPAKELPARAEQGQDRDFRRAVERASRSAEAVLQARASGGPVLEHQKVALER
AVQALDTLRPRASDDMAEAMKRDSGLLREAAAGRSGPMIEAIRQEARVRADPNLRADRFV
ERWQQLSQDRDRLYRAGDMAGRKTLGQEMAGMAKSLERDPQVESILRGRTRELGLEIGMS
PGRELGRELSRGLGISHDRGLSR
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctaccatttctcggccaaggtcatcagtcgcgccaacggatcgagcgccgtt
gccagcgcggcctatcgtgcggcggaacggctgcacgacgaccggctaggacgcgaccat
gatttctcgaacaaggccggcgtcgtccattcggaaatcatgttacccgaaggtacaccg
gagcgtttaaacgatcgcgcgaccctatggaacgaggtcgaggcgggcgagaaacgcaag
gacgcgcagctcgcccgcgaagtcgagttctcgattccgcgcgagctggaccagaaagag
ggcatccggctcgcccgcgattttgtcgaaaagcagtttgtcgagcgcggcatggtcgcg
gacatgaacgtgcattgggacttgggaaaggacgggcaatccaagccacacgcgcatgtc
atgctgtcgatgcgcgaggtagggctggagggcttcggccagaaggtgcgcgagtggaac
agcacggcgctgttgcaggagtggcgcgaggcgtgggccgatcatgtgaacgagcgcctc
gccgaactggatatagacgcgcgcatagatcatcgcagctatgaggcgcaggggatcgag
cttgagccgcagcacaagatcgggccggcggcgtcgcgtatgcccgaacaggggcttgag
gccgagcgggtcgaggaccatgcccggatcgcgcgggagaatggcgagaagatcatcgcc
aatccgcaaatcgcgctcgacgcgatcacgcgccaacaggcgacgttcacgcggcgcgac
ctggcgcagttcgcgttccggcatagcgacggcaaggaccagttcgatcaggtgatgagc
gcggtgcggacctcgcccgagctggtagcgctggggaaggacggacgcggcgaggaccgg
ttcacgtcgcgcgagatgatcgacaccgagcagcggttggagcgcgccggctacggccta
gcggatcgggccgggcatggtctcccggcggcgtctaaaatgggggggcgagacaccgcc
gagagggttggccttgcgctgggaagccagcagaaggacgcgctcgcgcatatcaccggc
aagaacgacttggcaattgtcgtcggctatgccggcaccggcaaatcgaccatgctgggc
gttgcgcgcgacgaatgggagcgggcgggctatcaggtgcgcggtgcggccttgtcgggg
atcgcggccgaggggcttgagggcggttccggtatcgcctcgcgcacgatcgccagcatg
gaatatcagtgggagcagggccgcgagctgctaggtccgcgcgacgtgctggtgattgac
gaggccggcatgatcggcacgcgccagatggagcgggtgctgtccgaggccgaacgggca
ggggccaaggtgatccttgtcggcgacgccgagcagttgcaggcgatcgaggctggcgct
gcgttccgatcgctggccgagcgctacggcgcggccgagatcagcgatgttcgccggcag
catgaggactggcagaaagacgccacgcgggcgctcgcaacaggccgcaccggcgaggcg
atccatgcctatgccgagcatggcatggtccacgcggccgagacgcgcgaggctgcgcgg
gaaagccttgtggagggctgggatcgcgctcgcatcgccgatcccgacaagacgcggatc
atcctcacccataccaatgccgaggtgcgcgacctgaacctggctgcgcgcgatcggctg
cgcgacgccggcgagctgggccaggacgtgcgcgtgtcggccgagcggggcgcgcgggag
ttcgcgaccggcgaccgcatcatgttcctcaagaacgatcgcggccttggggtgaagaac
ggcacgctgggcaaggtcgagcgcgtgtcgcccgacagcatggcggtgaagttggacgat
ggccgtcaagtcgcgttcgacctgaaagattatgcccatgtcgatcatggctatgcggcg
accatccacaaatcgcagggcgtgacggtcgatcgggcgcatgtgctggcgacccccggc
atggaccgccattcggcctatgtggcgctgtcccggcatcgcgacggggtgcagctccat
tacggccgcgatgacttcgccgacgatcgccggcttgtccgcacgctgtcgcgcgagcgg
gcgaaggatatggcgtccgactatccgatgtatcgggatcgcgatgccgaggcgcaatcc
ttcgccgatcggcgcgggctgtcgggtgagatccgcgttgcggatgcacccgagcggaag
ggcgtggagatcctcgcgccccgcgcgggaacttcacgccagatgggcgaggattcccgc
acgcccgatattggcggcgaccgcggtgccggcgaggcgaaggccgcggccgagcgtcag
tcgcggcgcggtatgttcgacggcttgaagctgtcggccgcgccggtgaaggcggccgag
ccagcacagggtgcgaaggaaaagccggctcccaagcggggcatgtttgacgggctgaaa
ctgccccagcgcacgccgacgccggagccggcgaaggaattgcccgcgcgggccgagcag
ggccaggatcgcgatttccggcgcgcggtcgagcgggcctcgcgttcggcggaggcggtg
ttgcaggcgcgggcgtcgggcgggccggtgctggaacatcagaaggtcgcgctcgagcgc
gcggttcaggcgctcgacacgctccggccgcgagcttcggacgatatggccgaggcgatg
aagcgcgattccggcttgctgcgcgaggcggcggcggggcgcagcggcccgatgatcgag
gcgatacgccaagaggcgcgcgtgcgggccgatccgaacttgcgcgccgatcggttcgtg
gaacgctggcaacagctctcccaggatcgcgaccggctttatcgcgccggcgacatggcg
ggccgcaagacgctcgggcaggagatggcgggcatggcgaaaagccttgagcgcgatccc
caggtggaatcgatcctgcgcggtcgcacccgcgagctggggcttgagatcggaatgagt
ccgggccgcgagcttgggcgcgagctgtcgcgggggttggggatcagtcacgatcgcgga
ttgagccgatag
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