Uncultured Sphingopyxis sp. UC10: SPPYR_0040
Help
Entry
SPPYR_0040 CDS
T05531
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphu03000
]
SPPYR_0040
Transcription factors [BR:
sphu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SPPYR_0040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
SBV31160
UniProt:
A0A1Y5PMG8
LinkDB
All DBs
Position
SPPYR:46540..47400
Genome browser
AA seq
286 aa
AA seq
DB search
MSGTATVWDGIRPRSARDVVARHRARLGRLGVLAATENLAAPTDWAFEEDHHVVVVHLGG
RLDRMECEFSVGPSGPARPARGDVWMIPAACRYAALAQGKRAEFVELSVPTALLADAPLA
ARVKHRDDFLFGAAARLAELVRGPDDDLARMASQAAGGAIERHLRERYGHQGRAARRGAL
SASDRNRLAEAIRGQLDAEHSLAGLAALVGMDVRRFTEAFRDAFGLSPWQYVMRARLDEA
ARRLWHGAEPVTEVALATGFASPSHFATAFARRFGVPPSRYRAGAR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggaaccgcgaccgtctgggatggcatcaggccgcgctcggcgcgcgacgtcgtc
gcacggcatcgggcgcggctcggccggctcggcgtgctcgccgccaccgaaaatctggcg
gcgccgaccgactgggcgttcgaggaagaccatcatgtcgtcgtcgtccatctcggcggc
cggctcgaccggatggaatgcgaattttcggtcgggccttcgggaccggcgcgcccggcg
cgcggcgatgtgtggatgatcccggcggcgtgccgctatgcggctttggcgcagggcaag
cgcgccgagttcgtcgaattgagcgtgccgaccgcgctgctcgccgacgcgccgctcgcc
gcgcgcgtgaagcatcgcgacgatttcctcttcggcgccgcggcgcgtcttgcggaactg
gtccgggggcccgacgacgatctggcccgcatggcgtcgcaggcggccggcggcgcgatc
gagcggcatcttcgcgaacgatatggacatcagggccgggcggcgcggcgcggcgcgctg
tcggcgtccgaccgcaatcgccttgccgaagcgatccgcgggcagctcgacgccgagcac
agccttgccgggctcgcggcgctggtggggatggacgtgcggcgctttaccgaggcgttc
cgcgacgctttcggcctctcgccctggcaatatgtgatgcgcgcgcggctcgacgaggcg
gcgcggcggctgtggcacggcgcggagccggtgaccgaggtggcgctggcgacgggcttt
gcgtcgccgagccatttcgcgaccgcctttgcgcgccgcttcggggtgccgccttcgcgc
taccgtgccggagcacgatag
DBGET
integrated database retrieval system
