Uncultured Sphingopyxis sp. UC10: SPPYR_0129
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Entry
SPPYR_0129 CDS
T05531
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphu03016
]
SPPYR_0129
Enzymes [BR:
sphu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SPPYR_0129
Transfer RNA biogenesis [BR:
sphu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SPPYR_0129
Prokaryotic type
Methylthiotransferases
SPPYR_0129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
GAP1-M
Motif
Other DBs
NCBI-ProteinID:
SBV31249
UniProt:
A0A1Y5PMJ9
LinkDB
All DBs
Position
SPPYR:complement(135145..136452)
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AA seq
435 aa
AA seq
DB search
MSAAPADRQQVVNFGCRLNIAEGEAIRSAVEAARARDVVVFNSCAVTDEAVRQARQAVRR
SLRERPGAEVVVTGCAAELEAERFAAMGARVVRNDAKGLAASYQSGVSPRRRGPISGGFE
MAPAGDGPLPSQGHREDYTPALSGADHARAFLGVQTGCSHSCTFCATVLARGTARSASVE
AVLDAARTALTRGQREIVLTGVDLASYGDDSGSSLAALVGALLALPVERLRLSSLDPDRI
DDALFALLTQEKRVMPHVHLSLQAGDDMVLARMKRRHRRADAVRLIERLKAARPEIAIGA
DLIAGFPTEDDAMFANSLALIDDCDIVFGHIFPYSPRADTPAARMPQVGRTVARERAATL
REANARRRQGWLDAQAGRTATMLVERDGLTGHAENFAAVTLTAPAAPGSIIDVRLLARDG
DRMVVTPTQEKDIAA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgcccccgccgaccgtcagcaggtcgtcaatttcggttgccggctcaatatc
gccgagggcgaggccatccggtcggccgtcgaggcggcgcgcgcgcgcgatgtggtcgtc
ttcaacagctgcgcggtgaccgacgaggcggtgcggcaggcgcggcaggcggtgcgccgg
agcctacgcgagcggccgggagcggaggtggtcgtgacggggtgcgcggcggagctcgag
gccgaacggttcgcggcgatgggcgcgcgggtggtgcgcaacgatgcgaaggggctggcg
gcgagttatcaatccggcgtgtccccgcgaaggcggggacccatctccggtgggttcgaa
atggcaccggccggtgatgggcccctgccttcgcaggggcacagggaagattacaccccc
gccctctcgggcgccgaccatgcgcgcgctttcctcggcgtgcagacgggttgctcgcac
agctgcacgttctgcgcgacggtgctcgcgcgcgggacggcgcggtcggcgagcgtcgag
gccgtgctcgacgccgcgcgcaccgcgctgacccgcgggcagcgcgaaatcgtcctgact
ggggtcgatctggcgagctatggcgacgacagcggctccagccttgccgcgctggtcggg
gcgctgctcgcgctgccggtcgaacgcctgcgcctctcctcgctcgaccccgaccgcatc
gatgatgcgctgttcgcgctgctgacgcaggaaaaacgcgtgatgccgcacgtccatctg
tcgctgcaggccggcgacgacatggtgttggcgcggatgaagcgccgccaccgccgcgcc
gacgcggtgcgcctgatcgagcggttgaaggctgcgcgccctgagatcgcgatcggcgcc
gacctgatcgcgggctttccgaccgaggatgacgcgatgttcgcgaactcgctggcgctg
atcgacgattgcgacatcgttttcggccatatctttccgtacagcccgcgcgccgacacc
cccgccgcgcggatgccgcaggtcggacgcaccgttgcacgcgaacgtgcggcgacgctg
cgcgaggccaatgcgcggcggcggcagggctggctcgacgctcaggccggccgcaccgct
acgatgctcgtcgagcgcgacggcctgaccggccacgccgaaaatttcgccgccgtgacg
ctgaccgcccccgcggcgcccggctccatcatcgacgtgcgcctgctcgcgcgcgacggc
gaccgcatggtcgtgacccctacgcaagaaaaggacatcgccgcatga
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