Uncultured Sphingopyxis sp. UC10: SPPYR_0130
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Entry
SPPYR_0130 CDS
T05531
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00300
Lysine biosynthesis
sphu00470
D-Amino acid metabolism
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01120
Microbial metabolism in diverse environments
sphu01230
Biosynthesis of amino acids
Module
sphu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SPPYR_0130 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SPPYR_0130 (dapF)
Enzymes [BR:
sphu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SPPYR_0130 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
SBV31250
UniProt:
A0A1Y5PMQ6
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All DBs
Position
SPPYR:complement(136449..137264)
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AA seq
271 aa
AA seq
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MRLMADRFTKMHGLGNDFVVIDARENGVEMTPARAHAIADRRHGIGCDQLILLEPSNSAD
VKMRIFNADGGEVEACGNATRCVATLIGKPAVIETLGGMLRVTPADGGAEVTLGEPQFDW
EHIPLAMPMDTRDMPVAWDELEHGAAVNVGNPHIVFFVPEADAVALDQLGPRIETDPLFP
ERVNVNVASLDGENQLQLRVWERGVGLTQACGTGACATAVAAIRAGLVQSPVTVSLPGGD
LVIRWASGEPIVMSGAATRVYEGETDWAQFG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatggcagaccgcttcaccaagatgcacggcctcggcaacgacttcgtcgtg
atcgacgcgcgcgagaacggcgtcgagatgacgcccgcgcgcgcgcatgcgatcgccgac
cgccgccacggcatcgggtgcgaccagctgatcctgctcgagccgtcgaacagtgcggac
gtgaagatgcgcatcttcaacgccgacggcggcgaggtcgaggcgtgcggcaatgcgacg
cgctgcgtcgcgacgctgatcggcaagcccgcggtgatcgagacgctgggcgggatgctg
cgcgtcacgccagccgatgggggcgccgaagtcacgctgggcgagccccaattcgactgg
gagcatatcccgctcgcgatgccgatggatacccgcgacatgcccgtcgcgtgggacgag
ctcgaacatggcgcggcggtcaatgtcggcaatccgcatatcgtctttttcgtgcccgag
gccgatgcggtcgcgctcgatcagctcggcccgcggatcgaaaccgacccgctgtttccc
gagcgcgtcaacgtcaatgtcgcgagcctcgacggcgagaaccagttgcagctgcgcgtg
tgggagcgcggcgtcggcctgacgcaggcgtgcggcaccggcgcctgcgcaaccgcggtt
gcggcgatccgcgcggggctggtgcaatcgccggtgacggtatcgctgcccggcggcgac
ctcgtcatccgctgggcctcgggcgagccgatcgtgatgagcggcgccgcgacgcgcgtc
tatgagggcgagaccgactgggcgcagttcggatga
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