Uncultured Sphingopyxis sp. UC10: SPPYR_0166
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Entry
SPPYR_0166 CDS
T05531
Name
(GenBank) Helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_0166
Enzymes [BR:
sphu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPPYR_0166
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPPYR_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
SBV31286
UniProt:
A0A1Y5PRD0
LinkDB
All DBs
Position
SPPYR:170558..173569
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AA seq
1003 aa
AA seq
DB search
MPRSPTIYSIPVQRAFADALVAGLIDRYADGALGLAEGLILLPSNRARSAVQAAFVRAGG
AGLLMPRLAVIGDADLDESVALALDPIDESDAMPPAIDALRRRLMLAALIEKHNVPGEEP
IVGAAAFQLADGLGRVIDQLHYEEVAPSRLAGIESALGDLAGHWQASWRRLSLLVDTWPA
MLAATGHIDRADRRNRLLDRVSKGWRAAPPARFVVAAGVTTAAPAIARLLRTAADLPQGM
VVLPGLDLGMAGEEWEALGPVKPEPENPARPLETHPQYHLKLLLGRMGVSRDEVMEWPAS
SPFDGPEARAPFTSLLFAPAAYTARWQQAGDLGPGIAGVSAAVFADDGQEAQGIALMMRR
ALETGERTAALVTPDRALATRVAAALARWDISVDDSAGQPLGQTPPGALLLALAEFAAAF
DPVRLVALLGHPLVRAGEARLGWLDQVRRLDLVLRGPGLVPGWGGVTARIAERAVDPTAR
GYAEAQAIGEWWRDAALALEASLAPFAAGVPAPPATLLGALQAALGWLTGDGVWTGHAGR
VLSELFDRWALAKGDGPALVAPADFPAMLTDLLSGESVRPPYGGHPRLFIWGLLEARLQR
ADLMILGGLDEGRWPQQQGPDPWLAPGIRRMLGLAAPERQQGAAAHDFAGAFAAREVVVT
RAQRSGGDPAVASRFWLRLAALAGDLPEARVDGESVVRLAAALDVPPGISAPAEKPRPAP
PLNARPTAISVTGVDQLARDPFAFYAAKILRLSELDPLSSGPDAKWFGIRVHKFLQDWQA
AGLTEAAFGAELAALRADPALDSLARAFWLPRIEPSLRWAAERIWASRDERWPVAGEVRG
ELVVDGTRLHGTADRVDQTVDGTLAIVDYKTGAAPSAKSTGDGLNSQLGLLGLLAQEAGL
GDLAPETVDAFEYWELRRDRKKGIDGAVKAIRGQKPKAATAAAVVERAQEVLADLMARYL
RSEEPFVPGEAGKRYADFDQLMRRDEWFGRGDADERADAEGAA
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgcccagatcccccaccatctactccatccccgtccagcgggcctttgccgacgcgctc
gtcgcggggctgatcgatcgttacgccgacggcgcattggggctggccgaagggctgatt
ctgctgccgagcaatcgcgcgcgaagcgcggtgcaggcggcgttcgtgcgcgcgggcggc
gcggggctgctgatgccgcggctcgccgtgatcggcgacgccgacctcgatgaaagcgtc
gctctcgcgctcgatccgatcgacgaaagcgatgcgatgccgcccgcgatcgatgcgctc
agacgccggctgatgctcgccgcgctcatcgagaagcacaatgtgccgggtgaggagccg
atcgtcggcgcggccgcctttcagcttgccgatgggctggggcgggtgatcgaccagctt
cactatgaagaggtcgcgccttcgcggctcgccggcatcgaaagcgcgctcggcgatctg
gcggggcattggcaagcgtcgtggcggcgattgtcgctgctcgtcgacacatggcccgcc
atgctcgccgcgacggggcatatcgaccgcgccgaccgccgcaaccggctgctcgatcgc
gtgagcaagggatggcgcgccgcgccgcccgcgcgcttcgtcgtggcggcgggcgtcacg
accgcggcgcccgccatcgcgcgattgctgcgcaccgccgccgatctgccgcagggcatg
gtggtattgccggggctcgacctcggcatggcgggcgaggagtgggaggcgctggggccg
gtgaaacccgaacccgaaaatccggcgcgcccgctcgaaacccacccgcaatatcatctg
aaattgctgctcgggcggatgggcgtgtcgcgcgatgaggtgatggagtggcccgcctcg
tcgccgttcgacgggcccgaggcgcgcgcgccgttcacgtcgctgctcttcgcgcccgcc
gcctatacggcgcgctggcagcaggccggcgatctggggcccggcatcgcgggggtgagc
gcggcggtgttcgccgatgacgggcaggaggcgcaggggatcgcgctgatgatgcgccgc
gcgctcgaaaccggcgagcggacggcggcgctggtgacccccgaccgcgcgctcgcgacg
cgcgtcgcggcggcgctcgcgcgctgggacatatcggtcgacgacagcgccgggcagccg
ctcgggcagacgccgcccggcgcgctgttgctcgcgctcgccgaattcgccgccgcgttc
gatccggtacggctcgtcgcgctgctcgggcatccgcttgtgcgcgcgggcgaggcgcgg
ctcggctggctcgatcaggtgcggcggctcgatctcgtgctgcgcggcccggggctggtg
ccgggatggggcggggtgacggcgcggatcgccgaacgcgcggtcgatccgacggcgcgc
ggttatgcagaggcgcaggcgatcggtgaatggtggcgcgatgccgcgctcgcgctcgag
gcgtcgctcgcgccctttgccgccggcgttcccgcaccgccggccacgctgctcggggcg
ttgcaggcggcgctcggctggctcaccggcgatggcgtgtggacggggcacgccggccgg
gtgctgtccgagctgttcgatcgctgggcgttggcgaagggcgacggccccgcgctcgtc
gcgcccgccgatttccccgcgatgctcacggaccttttgtcgggcgagagtgtgcggccg
ccctatggcgggcatccgcggctgttcatctgggggctgctcgaagcgcggctgcagcgc
gccgacctgatgatcctcggcgggctcgacgaggggcgctggccgcagcagcagggcccc
gatccgtggctcgcgccgggcatccgccggatgctggggctcgcggcgcccgagcgtcag
cagggcgcggcggcgcacgatttcgcgggcgccttcgcggcgcgcgaggtggtggtgacg
cgcgcgcagcgcagcggcggcgaccccgcggtggcgtcgcgcttctggctgcggctcgcg
gcgctcgcgggcgacctgcccgaggcgcgcgtcgacggcgagagcgtggtccgtcttgcc
gccgcgctcgacgtcccgccgggcatcagcgcgcccgccgaaaagccgcgccccgcgccg
ccgctcaacgcccggccgaccgcgatcagcgtcaccggagtcgatcagctcgcgcgcgat
cccttcgccttttacgcggccaagatattgcggctgagcgaactcgatcccttgagcagc
ggccccgatgccaaatggttcggcatccgcgtccataaattcctgcaggactggcaggcg
gcggggttgaccgaagcggcgttcggtgccgaactggcggcgctgcgtgccgacccggcg
ctcgattcgctcgcgcgggctttctggctgccgcggatcgagccgtcgctgcgctgggcg
gcggaacgcatatgggcgtcgcgcgacgagcgttggccggtcgcgggcgaggtacgcggc
gaactggtcgtcgacggcacccggctgcacggaaccgccgatcgcgtcgaccagacggtc
gacggcacgctggcgatcgtcgattacaagacgggcgcggcgccgtcggccaaatcgacc
ggcgacgggctgaacagccagctaggtctgttgggcttgctggcgcaggaggcggggctc
ggcgaccttgcgcccgaaacggtcgatgcgttcgaatattgggaattgcggcgcgaccgg
aaaaagggcatcgacggcgccgtcaaggcgatccgcgggcaaaagcccaaggccgcgacg
gccgcggcggtcgtcgaacgcgcgcaggaggtgctcgccgatctgatggcgcgttacctg
cgcagcgaggagcccttcgttccgggcgaagcgggtaagcgttatgccgatttcgaccag
ctgatgcgccgcgacgaatggttcgggcgcggcgatgcggacgagcgcgcggacgcggag
ggcgcggcatga
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