Uncultured Sphingopyxis sp. UC10: SPPYR_0167
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Entry
SPPYR_0167 CDS
T05531
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_0167
Enzymes [BR:
sphu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPPYR_0167
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPPYR_0167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
SBV31287
UniProt:
A0A1Y5PUW1
LinkDB
All DBs
Position
SPPYR:173566..177096
Genome browser
AA seq
1176 aa
AA seq
DB search
MIDPDKLLKRLDPGQRAAAQPDDHVWLGASAGTGKTQVLSARVLRLMLEGVSPEAILCIT
FTKAGAAEMAHRIHERLAMWVRMDDGDLRAELQALGLDLELIGYDRGVPALMRRARSLFA
TVIDSPGGAVRVQTIHSFCQTLLASFPLEARILPGFRALEDGEAGALQREVLGTLLAQPG
ADGDAMRGVAAMLSRRLGQDAAIAFLARCASSFTAANSPRLAPKAHDSRTLLGLPHGDPA
EWQAAALAGGAIADGDIAAVAVSGRDWGTKTGEGRAAVMGDWSRADMRGRAAMLAELRGC
FLTATGDMRADYVKEKGGMRGCLSAAERIVAATGDLLATASAMQVADELAAAWDLGSRFA
ETYALAKRAKGYADFDDLISIAGHLLAIGDFGEWVRFKLDQRTDHILVDEAQDTNTRQWE
IIASLAGEFFAGAGAKDDRVRTMFTVGDRKQAIFGFQGTDPTAFEAARRSFAKQAEAGGR
SFEDVDLDTNYRSSPAVLDVVNEWIAAGAPELMGLASDEPPHIPADFNRDRAGRVELWEP
LPVGKALDAAADDESEADESEDAAGSSDSSVAASDPASLRLSRAIADEVQDWIEHGKDGR
SVAPGDILILVRRRRDLAARIVARLQSRHVPVAGVDRFSLTQSLAVQDLLAAMRFAVQPL
DDLNLASLLVSPLLGWTQDDLFRFAHNRKGRALWEQLRARESEVPPETMAALRGWLGMAD
FTTPFRFLDALLSGPLDGRRKLYRRLGREARDPIDELLGQALAFERQEAPSLLGFLAHIT
ASTAEIKRQSEARSDVVRVMTVHGSKGLQAPIVILADATDDPRPRRLSVDLSMGEWEKLP
LFALGKDERYGAVAKAYDDKEAAEREEHWRLLYVAMTRAEELLVVAGITKTADRSLPDHN
WHSAVEAVMADMGAGWQDAGPRWGRKRVHAVQPGKWARPPKDRARQVPAPVVVPPWARQS
APEEARPPRPLAPSALGEDDVASPPQGGERAVAVERGLLLHALFERLPPVRPERRRAAAL
HWLSVQAAALDEAARAGMVDEVLAVLDDPAHAALFGPGSLAEVPLSAVVDGVVVAGIVDR
LLVTDEAVTVIDYKTGRHVPAGEAEVAPAYLRQMAAYRDALAVIFPGRRVAAALLYTAAP
RLIVLGDALLDAHKPGLRATKANLPGSALEPDAPTP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcccgacaagcttctgaaaaggctcgatccggggcagcgcgcggccgcgcag
ccggacgatcatgtctggctcggcgcgtcggcggggaccggcaagacgcaagtgctgtcg
gcgcgcgtgctgcgcctgatgctggaaggcgtgtcgcccgaggcgatcctgtgcatcacc
ttcaccaaggcgggcgccgccgaaatggcgcaccgcatccacgagcggctggcgatgtgg
gtgcggatggacgatggcgacctgcgcgccgagcttcaggccctgggactcgacctcgag
ctcatcggctatgatcgcggcgttccggcgctgatgcggcgcgcgcgatccttgttcgcg
acggtgatcgacagccccggcggcgccgtgcgggttcagacgatccacagtttctgccag
accctgctcgccagctttccgctcgaagctcggatcctgccggggtttcgcgcgctcgag
gatggggaggcgggcgcgttgcagcgcgaggtgctgggcacgctgctggcacagccggga
gccgacggcgatgcgatgcgcggcgtcgccgcgatgctctcgcggcggctggggcaggat
gccgccatcgccttcctcgcccgctgcgcgagcagcttcaccgcggcgaacagcccgcgc
ctggcgccgaaggcgcatgattcgcggaccctgcttggcctgccgcacggcgacccggcc
gaatggcaggcggcggcgctggcgggcggcgcgatcgccgatggcgacattgccgccgtc
gccgtcagcgggcgcgattgggggacgaagacgggcgaaggccgcgccgcggtcatgggc
gactggtcgcgcgccgatatgcgcggacgtgccgcgatgctggcggagttgcgcggctgc
ttcctgaccgccaccggggacatgcgcgccgattatgtcaaggaaaagggcgggatgcgc
ggctgcctgagcgccgccgaacgcatcgtcgcggcgaccggcgacttgctggcgaccgcc
tcggcgatgcaggtcgccgacgaactggcggcggcctgggatctcgggagccgctttgcc
gaaacctatgcgctcgccaagcgggcgaagggttatgccgatttcgacgatctgatcagc
atcgccggccacctgcttgccatcggcgatttcggcgagtgggtgcgcttcaagctcgac
cagcgcaccgatcatatcctggtcgatgaggcgcaggacacgaacacgcggcagtgggaa
atcatcgcgtccctcgccggagagtttttcgcaggcgccggagccaaagacgatcgtgtc
cgcacgatgttcaccgtaggcgaccgcaaacaggcgattttcggcttccaaggaactgat
ccgacggcattcgaggctgcccgacgcagttttgccaaacaggctgaggcgggcggcaga
tcgttcgaggatgtcgatctcgataccaattaccgctcaagccccgccgtgcttgacgtc
gtaaatgagtggatcgcggcgggtgcgcccgaattgatggggctcgccagcgacgagccg
ccgcatattcccgccgatttcaaccgcgaccgcgcgggccgcgtcgaattgtgggagccg
ctgccggtcggcaaggcgctcgatgccgccgctgatgatgaaagcgaggctgacgaaagc
gaagacgcggcgggatcaagcgactcgtcggtggcggcgagcgatcccgcgagcctgcgc
ctgtcgcgcgcgatcgccgacgaggttcaggactggatcgaacatggcaaggacgggcgc
agcgtcgcgccgggcgacatattgattctggtccgccgccgccgcgaccttgcggcgcgg
atcgtcgcgcggctgcaatcgcggcatgtgccggtcgcgggggtcgaccgcttttcgctg
acgcaatcgctcgcggtgcaggacctgctcgcggcgatgcgcttcgcggtccagccgctc
gacgacctcaacctggcgagcctgctcgtttcgccgctgctcggctggacgcaggatgat
ctgttccgcttcgcccataatcggaagggccgcgctttatgggagcaattgcgcgcgcgc
gaaagcgaggttccgcccgaaacgatggcggcgctgcgcggatggctcggcatggccgac
ttcacgacaccctttcgcttcctcgacgcgcttttgtcggggccgctcgatgggcggcgc
aagctctatcgccgattggggcgcgaggcgcgcgacccgatcgacgagctgctcgggcag
gcgctcgccttcgagcggcaggaggcgccgtcgctgctcggtttcctggcccatatcacg
gccagcacggccgagatcaaacgccagagcgaggcgcgcagcgacgtcgtgcgggtgatg
acggtgcatgggtcgaaggggctgcaggcaccgatcgtcatccttgccgacgcgaccgac
gacccgcggccgcggcggctgagcgtcgacctgtcgatgggcgagtgggagaaattgccc
ctgttcgcgctcggcaaggacgaacgctacggcgctgtcgccaaggcctatgacgacaag
gaagcggccgagcgcgaggagcattggcggttgctctatgtcgcgatgacgcgcgccgag
gaattgctcgtcgtcgccggaatcaccaagaccgccgaccgcagcctgcccgatcataat
tggcacagcgcggtcgaggcggtcatggccgatatgggcgccggctggcaggacgccggg
ccgcgctgggggcgcaagcgcgtccatgccgtgcagcccgggaaatgggcgcgcccgccg
aaggacagggcgcggcaagtgccggcgccggtcgtcgtgccgccctgggcgcggcaatcg
gcccccgaggaagcgcgtccgccgcggccgcttgcgccgtcggcgctcggcgaggacgat
gtcgcgtcgccgccgcaggggggcgagcgcgcggtggctgtggagcgcgggctgttgctc
cacgcactgttcgagcgattgccgccggtccggcccgagcgccgccgcgccgccgcgctg
cactggctgtcggtgcaggccgcggcgctcgacgaggcggcgcgcgcggggatggtggac
gaggtgctggcggtgctggacgacccggcgcacgccgcgctgttcggtccgggcagcctc
gccgaagtgccgctgtcggcggtggtcgacggcgtcgttgtcgcggggatcgtcgaccgc
ctgctggtgaccgacgaggcggtgaccgtgatcgattacaagaccgggcggcatgtcccg
gcaggggaggcagaggtcgcgcccgcctatctgcgccagatggcggcctatcgcgatgcg
ctggcggtgatctttccgggacggcgggtcgcggcggctttgctctataccgcggcgccg
cggctgatcgtccttggcgacgcgttgctcgacgcgcacaagccgggcttgcgcgcaacc
aaggcgaatttgccgggttcagcccttgagccggacgcgccgacgccttag
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