Uncultured Sphingopyxis sp. UC10: SPPYR_0389
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Entry
SPPYR_0389 CDS
T05531
Symbol
dadB
Name
(GenBank) Alanine racemase, catabolic
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00470
D-Amino acid metabolism
sphu01100
Metabolic pathways
sphu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SPPYR_0389 (dadB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SPPYR_0389 (dadB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphu01011
]
SPPYR_0389 (dadB)
Enzymes [BR:
sphu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
SPPYR_0389 (dadB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sphu01011
]
Precursor biosynthesis
Racemase
SPPYR_0389 (dadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
DUF4081
Motif
Other DBs
NCBI-ProteinID:
SBV31509
UniProt:
A0A1Y5PNB4
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All DBs
Position
SPPYR:complement(401876..403006)
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AA seq
376 aa
AA seq
DB search
MDEGGISGGRLRIDLGAIAANYRLIAGRVAPAEAGAVVKANAYGLGAVEVTRALRDAGCR
LFFVAHLGEALALRPALPADLRLIVLNGLPPGAEALCAEAHVIPVLNSPEQARRWAEAAR
KTGRRLPAALQFDSGMGRLGMAAEDLAPLAADALFLSAVDLVMVMSHLACADTPEHPANR
AQLARFEAAAALFPGIPRALANSGGAFLPAGFHADIVRAGIALYGGAPNRDGPNPMQPVV
GLEARVIQIRTIAAGGAVGYGHSHVCERESRIATIGVGYADGLPRSLGNRGAAWHAGERL
PIVGRVSMDSITIDVTALAPGRIGAGDWVELIGPHQPIDALADDADTISYEMLTSLGARY
DRSYVDAATCNRGDTI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagggggcataagcggcggacggctgcgcatcgacctgggcgccatcgcggcg
aactaccggctgatcgccgggcgtgtcgctcccgccgaggccggcgccgtcgtcaaggcg
aacgcttacgggctcggcgccgtagaagtgacgcgggcgctgcgcgacgccgggtgccgg
ctctttttcgtcgcccatctgggcgaggcgctggcgctgcgcccggcgctgcccgccgac
ctgcgactgatcgtgctcaacggcttgccgccgggcgccgaggcgctgtgcgccgaagcc
catgtcatcccggtcctcaactcgcccgaacaggcgcggcggtgggcggaggcggcacga
aagaccggcagacggcttcccgccgcgcttcagttcgacagcggcatggggcggctgggg
atggcagcggaggatctggcgccgctggcggccgacgccctattcctctcggccgtcgat
ctcgtcatggtgatgagccacctcgcctgcgccgacacgcccgagcatcccgccaatcgc
gcgcagctcgcacgcttcgaggccgcggccgcactgttccctggcattccccgcgccctc
gccaattcgggcggcgcctttctgcccgccgggtttcacgccgacatcgtgcgggccggc
atcgcgctctacggcggcgcccccaaccgcgacggccccaatccgatgcagccagtcgtc
gggctggaggcgcgcgtcatccagatccggacaatcgcggcgggcggcgcggtcggctat
ggtcacagccatgtctgcgaacgcgaaagccgcatcgcgacgatcggggtcggctatgcc
gacggattgccgcgctcgctcggcaatcgcggcgcggcatggcacgccggcgagcggctg
ccgatcgtcggccgcgtgtcgatggacagcatcacgatagacgtcaccgccctcgcgccg
ggccgcatcggagccggcgactgggtcgaactgatcggcccgcatcaaccgatcgacgcg
ctcgccgacgacgcggacaccatctcctacgagatgctgaccagcctcggcgcgcgatat
gatcgcagctacgtcgatgcggcgacatgcaataggggagacacgatatga
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