Uncultured Sphingopyxis sp. UC10: SPPYR_0398
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Entry
SPPYR_0398 CDS
T05531
Name
(GenBank) Transcriptional regulator, Crp/Fnr family (fragment)
KO
K15861
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPPYR_0398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphu03000
]
SPPYR_0398
Transcription factors [BR:
sphu03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SPPYR_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
MarR_2
HTH_20
HTH_IclR
HTH_23
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
SBV31518
UniProt:
A0A1Y5PNE1
LinkDB
All DBs
Position
SPPYR:408600..409280
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AA seq
226 aa
AA seq
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MQGLSAEVERGVVPQDTILKFRKGEIIFSQGDPGDCWFEVISGTVRTCHFHIDGHRQLTG
FFYQGDVFGVEYGARDSAAEAVTNAVLARRPASNGGSDAPGQNRALERALDSANQCIFLL
GRRNANERVAAFLLMAAKRLSAIGSVPLPMTRGDIADHLGLTIHTVSRTISGFVRQGLIE
LDGPQSCRLLDPGGLRAIAGEEAEVAIDRMGAVRMRRAFAGQELGA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggtctgtcggcagaagttgagcggggggtagttccgcaggacaccatcctgaaa
ttccgtaaaggcgaaatcatattttcgcagggcgatccgggggattgctggttcgaagtc
atatccggcaccgttcgaacctgtcattttcacattgacggtcatcgccagctgacgggc
tttttctatcagggcgacgtgttcggcgtcgaatatggcgcgcgcgattcggcggccgaa
gccgtgacgaacgccgtgctggcgcgccgtcccgcgtcgaacggggggagcgatgcgcct
gggcagaaccgcgctctcgagcgcgcgctcgacagcgcgaaccagtgcatcttcctgctc
ggccgccgcaatgcgaacgaacgcgtcgcggcctttctgctgatggcggcgaagcgattg
tcggcgatcggcagcgttcccctgccgatgacgcgcggcgacatcgccgaccatctgggg
ctgacgatccataccgtgagccgtaccatatcgggcttcgtccgtcagggcctgatcgag
ctcgacggaccgcagtcgtgccggttgctcgatccgggcgggctgcgcgccatcgccggc
gaagaggcggaggtggcgatcgacaggatgggcgcggtgcggatgcggcgagccttcgcc
gggcaggagctgggggcatga
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