Uncultured Sphingopyxis sp. UC10: SPPYR_0517
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Entry
SPPYR_0517 CDS
T05531
Symbol
xseB
Name
(GenBank) exonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SPPYR_0517 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_0517 (xseB)
Enzymes [BR:
sphu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SPPYR_0517 (xseB)
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SPPYR_0517 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Motif
Other DBs
NCBI-ProteinID:
SBV31637
UniProt:
A0A1Y5PVW5
LinkDB
All DBs
Position
SPPYR:554538..554801
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AA seq
87 aa
AA seq
DB search
MTDTPDPAAAADIASLSFEAAMGELETIVRRLESGDVSLEESVTLYERGHALRGHCEARL
AAAQARIEQVSLGADGRPAGTTSFGES
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgacggatacccccgaccccgctgccgccgcggacatcgcctcgctgtcgttcgaagcc
gcgatgggcgagctcgaaacgatcgtgcggcggctcgaaagcggcgacgtcagcctcgag
gaatcggtgacgctttacgagcgcggccatgcgctccgcggtcattgcgaagcgcggctg
gcggcggcgcaggcgcggatcgagcaggtcagcctgggcgccgacggccggcccgcggga
accacgtccttcggcgaaagctga
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