Uncultured Sphingopyxis sp. UC10: SPPYR_0823
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Entry
SPPYR_0823 CDS
T05531
Symbol
icd
Name
(GenBank) Isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00020
Citrate cycle (TCA cycle)
sphu00480
Glutathione metabolism
sphu00720
Other carbon fixation pathways
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01120
Microbial metabolism in diverse environments
sphu01200
Carbon metabolism
sphu01210
2-Oxocarboxylic acid metabolism
sphu01230
Biosynthesis of amino acids
sphu04146
Peroxisome
Module
sphu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphu_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPPYR_0823 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
SPPYR_0823 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SPPYR_0823 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPPYR_0823 (icd)
Enzymes [BR:
sphu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SPPYR_0823 (icd)
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Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
SBV31943
UniProt:
A0A1Y5PPI6
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Position
SPPYR:complement(890759..891973)
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AA seq
404 aa
AA seq
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MGKIKVANPVVELDGDEMTRIIWQWIRERLILPYLDVDLHYYDLGIEERDRTDDKITVDA
ANAIKKYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVMKNVPRL
VPGWTDPIVVGRHAFGDQYKATDFRVPGPGKLRLVFEGEDGTLIDEEVFQFPSSGVAMGM
YNLDDSIRDFARASLNYGLAREWPVYLSTKNTILKAYDGRFKDLFEEVFQAEFKAKFDAL
GIVYEHRLIDDMVASALKWSGKFVWACKNYDGDVQSDTVAQGFGSLGLMTSVLMTPDGQT
VESEAAHGTVTRHYRMHQQGKATSTNPIASIFAWTGGLKHRGKLDGNAELVKFADDLEKV
CVATVESGKMTKDLALLIGPDQNWLTTEGFFEAIVENLDKKMGA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatcaaggtagccaacccggtcgtcgaactcgacggcgacgaaatgacccgg
atcatctggcagtggatccgcgagcggctgatcctcccctatctcgacgtcgatctccat
tattacgacctcggcatcgaggaacgcgaccgcaccgacgacaagatcaccgtcgatgcc
gcgaatgcgatcaaaaaatatggcgtcggcgtgaagtgcgcgacgatcacccccgacgaa
gcgcgcgtcgaggaattcggcctcaagaagatgtggaagtcgccgaacggcacgatccgc
aacatcctgggcggcgtcgtcttccgcgaaccgatcgtgatgaagaatgtcccgcgcctc
gtccccggctggaccgacccgatcgtcgtcgggcgtcacgcgttcggcgaccagtataag
gcgaccgacttccgcgtccccggccccggcaagctgcgcctggttttcgaaggcgaagac
ggcacgctgatcgacgaggaagtgttccagttcccctcgtcgggcgtcgcgatgggcatg
tacaatctcgacgattcgatccgcgacttcgcgcgcgccagcctgaactatggtctcgcc
cgcgaatggccggtgtatctgtcgaccaagaacacgatcctcaaggcctatgacggccgc
ttcaaggacctgttcgaggaagtgttccaggccgaattcaaggcgaagttcgacgcgctc
ggcatcgtctacgaacaccgcctgatcgacgacatggtcgcctcggcgctcaaatggtcg
ggcaagttcgtctgggcctgcaagaattatgacggcgacgtccagtcggacaccgtcgcg
cagggcttcggctcgctcgggctgatgaccagcgtgctgatgacccccgacggccagacc
gtcgaatccgaagccgcgcacggcaccgtcacgcgccattaccgcatgcaccagcagggc
aaggcgacctcgaccaacccgatcgcgtcgatctttgcctggaccggcggcctcaagcac
cgcggcaagctcgacggaaacgccgagctggtgaagttcgccgacgacctcgaaaaggtc
tgcgtcgcgacggtcgagagcggcaagatgaccaaggatctcgcgctgctgatcggtccc
gaccagaattggctgacgaccgaaggcttcttcgaggcgatcgtcgagaacctcgacaag
aagatgggcgcataa
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