Uncultured Sphingopyxis sp. UC10: SPPYR_0897
Help
Entry
SPPYR_0897 CDS
T05531
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphu02000
]
SPPYR_0897
Transporters [BR:
sphu02000
]
Other transporters
Pores ion channels [TC:
1
]
SPPYR_0897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
TrbC_Ftype
Motif
Other DBs
NCBI-ProteinID:
SBV32017
UniProt:
A0A1Y5PWV7
LinkDB
All DBs
Position
SPPYR:complement(969229..971358)
Genome browser
AA seq
709 aa
AA seq
DB search
MRLLCSAGFTFALFLAAPAFAQDSAAASSDDDVHSGGPIVVTAPYVRSLDILGNVSVLEG
DELARDIRGQIGDTLTRQPGVSATSFSPGASRPVLRGFSGERVKVLTDGIGSIDASNTSA
DHAVTIDPLTVERVEILRGPAVLLFGSQAIGGAVNLFDRRIPRKVPADHVHIDAIGGYAT
AANDRNIGSSIDVALSPQIVAHLDGSWRKTGDTRSGGFVYAPDIRGDLLHLAEHEAEEGH
LDEAAELTEQAGKRGKIDNTQSETWTTGGGISLINDGGQLGISVGYFDTRYGVPARAGTE
HHHEDGEEEEGGHDHGEGPVTIGMKQWRADLRGEVELGDGFFDKLRIRAGFADYKHTEFE
GDEVGTIFTNQGVEGRLELAQNDHGGWRGASGVQYSHRDFNAIGAEAFVPRNLTDQFALF
TLQELTMGPLGLEAAARYEKTNVRAQTLGFERNFDSFSGALGATYDVFEGAKFGVSVSRA
VRAPSAEELLSNGPHIATQSFEVGDPNLRLEKNWGADASFKFKSDGFNLSLTGYSNWFDN
FIYSAATGAEEDELPVFQYFQRDARVYGFEAEASAQLAQIGGFNIVGDVTADMTRAKIKN
AGLDRNVPRIPPLRVLGGLEAQGERVNARVEVEWADDQTRVAQFETPTDGFTLVNASLSW
RPLPDAKNLTLMLSANNIFDVEARRHASFTKDYVPLAGRDFRLTARASF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgctttgctccgccggttttacctttgccctcttcctcgccgcgcccgccttt
gcgcaggacagtgcggcggcaagcagcgacgacgatgtgcattccggcgggccgatcgtc
gtcaccgcgccctatgtccgcagcctcgacatcctcggcaatgtatcggtgctcgaaggc
gacgagctggcgcgcgacattcgcggccagatcggcgatacgctcacccggcagccgggc
gtgtcggcgacgagcttttcgccgggcgcgtcgcgccccgtcctccgcggcttttcgggc
gaacgcgtcaaggttctgaccgacggcatcggatcgatcgacgcttcgaacacatcggcc
gaccatgcggtgacgatcgacccgctgaccgtcgaacgcgtcgaaatcctacgcggcccc
gcggtgctgctgttcggcagccaggcgatcggcggcgcggtcaacctgttcgaccgccgg
attccgaggaaagtcccagccgaccatgtccatatcgacgcgatcggcggctatgcgacc
gcggcgaacgaccgcaatatcggcagctcgatcgacgtcgcgctgagcccgcagatcgtc
gcgcacctcgacggcagctggcgcaagaccggcgacacgcgctcgggcggcttcgtctat
gcccccgatattcgcggcgacctgctccacctcgccgagcatgaagccgaagaggggcat
ctggacgaagccgccgaactgaccgaacaggcgggcaagcgcggcaagatcgacaacacc
cagagcgagacctggaccacgggcggcggcatctcgctgatcaacgacggcggccagctc
ggcatttcggtcggctatttcgacacccgctatggcgtccccgcgcgcgccggaaccgaa
catcatcacgaggatggcgaggaagaagaaggcggccacgatcacggcgaaggcccggtc
acgatcggaatgaagcaatggcgcgccgacctgcgcggcgaagtcgagctgggcgacggc
ttcttcgacaagctgcgcatccgcgcgggcttcgccgattacaagcacaccgagttcgag
ggcgacgaggtcggcaccatcttcaccaaccagggcgtcgaaggccggctggagctggcg
cagaacgaccacggcggctggcgcggcgcgagcggtgtccagtatagccaccgcgatttc
aacgcgatcggcgccgaggcctttgtcccgcgcaacctgaccgaccagttcgcgctgttc
acgctacaggaattgacgatgggcccgttggggctcgaagccgcggcgcggtacgaaaag
accaatgtgcgcgcgcagacattgggattcgagcgcaatttcgacagcttctcgggagcg
ctcggtgcgacctatgatgtcttcgaaggcgcgaaattcggcgtttcggtctcgcgcgcg
gtccgggcgccgtcggccgaggaactgctgtcgaacggcccgcacatcgcgacgcagagc
ttcgaggtcggcgacccgaacctgcggctcgagaaaaactggggcgccgacgcgtcgttc
aagttcaagtccgacggctttaacctcagcctcaccggctattcgaactggttcgacaat
ttcatctattcggccgcgaccggcgctgaagaggatgaactgcccgtcttccaatatttt
cagcgcgacgcgcgcgtctatggtttcgaggccgaagcgagcgcgcagctggcgcagatc
ggcggcttcaacatcgtcggcgacgtcaccgccgacatgacgcgcgcgaagatcaagaat
gcggggctcgaccgcaatgtcccgcgcatcccgccgctgcgcgtgctcggcgggctcgag
gcgcagggcgagcgcgtcaatgcgcgcgtcgaggtcgaatgggccgacgaccagacccgc
gtcgcacaattcgagacgccgaccgacggcttcacgctcgtcaacgcgtcgctgagctgg
cgcccgcttcccgatgcgaagaatctgacgctgatgctgtcggcgaacaatatcttcgac
gtcgaagcgcgccgccacgcgagcttcaccaaggattatgtgccgctcgcgggccgcgac
ttccgcctgacggcccgggcgagcttttag
DBGET
integrated database retrieval system
