Uncultured Sphingopyxis sp. UC10: SPPYR_0970
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Entry
SPPYR_0970 CDS
T05531
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphu02000
]
SPPYR_0970
Transporters [BR:
sphu02000
]
Other transporters
Pores ion channels [TC:
1
]
SPPYR_0970
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
SBV32090
UniProt:
A0A1Y5PQ47
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All DBs
Position
SPPYR:complement(1065038..1066897)
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AA seq
619 aa
AA seq
DB search
MLKFASISLIALATATPVFAETADSERGDDIVVTASGIEQPRDEVGQAITILDAETIERR
RSADVVDLLATTPGVRFSRSGSTGSVASISLRGAETTQTLVLIDGVKVNDPSGIGDGYDF
GHLLTGNIDRIEVLRGSNSVVHGSQAIGGIVSLMTATPADGFAADASAEYGYSDSLNAKA
DVSGTTGAISGRIGGAYFRTDGISSAAVGTEKDGYKNFAGNARLKVALGDALSLDLRGYY
INADLDYDSFFGAPADSADVAKLDQYVGYAGLNLGLFDGNFTNRAAVTWMRNERDYYFVR
GTAPDYGYSGTNLRFEYQGVVTPASQAKLIFGYEHERPDYDFFGFGSTDSQRANIDSVYA
LGIVQPLAGLSLSGGVRHDDHSQFGGATTLGANANYSPNAGATNFRLSYGEGFKAPSLYQ
LYDASSGNTALRPERSKSYDIGIDQSLADGRALISLTAFLRNTVDQINYDNTTFTYGNID
RTRAKGVEATLGLKPVDALNVTASYSYIDARDRSGRPAFDGKRLPRRAEHAVSLSADYDW
SFGLSTGATLTMVDDSFDDFANNVPLDGYALAGIRASFPVGPNFEITGRVDNLFDADYAT
AFNYGTYGRAAYGGVRARF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtttgcaagcatttccctgatcgccttggctaccgcaacgccggtttttgca
gagaccgccgacagcgagcgcggcgacgacatcgtcgtcacagcatcggggatcgaacag
ccgcgcgacgaggtcgggcaagcgatcacgatcctcgacgccgagacgatcgagcggcgt
cgatcggccgatgtcgtcgacttgctcgcgaccacgcccggcgtgcgcttcagccggtcg
ggcagcaccggatcggtagcgagcatatcgctgcgcggggccgaaacgacgcaaaccttg
gttctgatcgacggggtgaaggtcaacgatccgagcggcatcggcgacggatatgatttc
ggccatctgctgaccggcaatatcgaccggatcgaggtgctgcgcggatcgaactcggtc
gtccacggcagccaggcgatcggcggcatcgtcagcctgatgaccgcgacgcccgccgac
ggcttcgcggccgacgcctcggccgaatatggctatagcgatagtttgaatgccaaggcc
gacgtgtcgggcaccaccggggcgatttcgggcaggatcggcggcgcttatttccgcacc
gacggcatttcgtcggcggcggtcggcaccgagaaggacggatacaagaatttcgccggc
aacgcgcggctgaaggtcgcgctcggcgacgcgctgagcctcgacctgcgcggttattat
atcaacgccgacctcgattatgacagctttttcggcgcccccgccgacagcgccgacgtc
gccaagctcgaccaatatgtcggctatgcggggctgaaccttggtctgttcgacggcaat
ttcaccaaccgcgcggcggtgacgtggatgcggaacgagcgcgattattatttcgtgcgc
gggacggcgcccgattatggttattcgggcaccaatctgcggttcgaatatcagggcgtc
gtgacgccggccagccaagcgaagctgatcttcggttacgagcatgagcgccccgattat
gatttcttcggctttggatcgaccgacagccagcgtgcgaacatcgacagcgtctatgcg
ctggggatcgtccagccgcttgccgggctgtcgctgtcgggcggcgtccgccacgacgac
catagccagttcggcggcgcgaccacgcttggcgccaacgccaattattcgcccaatgca
ggcgcgaccaatttccggctgagctatggcgagggtttcaaggcgccgtcgctctatcag
ctttacgacgcgtccagcggcaacaccgcgctgcgccccgagcggtcgaaaagctatgac
atcggcatcgaccagagcctcgccgacggccgcgcgctgatctcgctgaccgcgttcctg
cgcaacacggtcgaccagatcaattacgacaatacgaccttcacctatggcaatatcgac
cgcactcgcgccaagggggtcgaggcgacgctggggctgaagcccgtcgacgcgctgaac
gtcaccgcgtcgtacagctatatcgacgcgcgcgaccggtcggggcgacccgcgttcgac
ggcaagcgcctgccccgccgcgccgaacatgcggtcagcctgtcggccgattatgactgg
tcgttcgggctgtcgacgggtgcgacgctgacgatggtcgacgacagtttcgacgatttt
gccaataacgtaccgctcgacggctatgcgctcgccgggatccgcgcgtccttcccggtg
gggccgaatttcgagattaccggccgcgtcgacaatctgttcgacgccgattatgcgacg
gccttcaattacggcacctatggccgcgcggcctatggcggcgttcgggcgcgcttctga
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