Uncultured Sphingopyxis sp. UC10: SPPYR_1002
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Entry
SPPYR_1002 CDS
T05531
Symbol
ndk
Name
(GenBank) multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase
KO
K00940
nucleoside-diphosphate kinase [EC:
2.7.4.6
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00230
Purine metabolism
sphu00240
Pyrimidine metabolism
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01232
Nucleotide metabolism
sphu01240
Biosynthesis of cofactors
Module
sphu_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
sphu_M00050
Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
sphu_M00052
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
sphu_M00053
Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
sphu_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SPPYR_1002 (ndk)
00240 Pyrimidine metabolism
SPPYR_1002 (ndk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sphu04131
]
SPPYR_1002 (ndk)
Enzymes [BR:
sphu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.6 nucleoside-diphosphate kinase
SPPYR_1002 (ndk)
Membrane trafficking [BR:
sphu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
SPPYR_1002 (ndk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NDK
Motif
Other DBs
NCBI-ProteinID:
SBV32122
UniProt:
A0A1Y5PQ12
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All DBs
Position
SPPYR:1109729..1110151
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AA seq
140 aa
AA seq
DB search
MAVTRTFSIIKPDATRRNLTGAVTKMLEDAGLRVVASKRIHMTKEQAEGFYAVHKERPFF
GELVTFMTSGPVVVQVLEGENAMQRNRDIMGATNPKDAAPGTIRKELAESIEANTVHGSD
SDENAAIEIAYFFKPEEIVG
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcacccgcaccttttcgatcatcaagcccgacgccacgcgtcgcaacctcacc
ggcgccgtcaccaagatgctcgaggacgccggcctccgcgtcgtcgcgtcgaagcgcatc
cacatgaccaaggaacaggccgaaggcttctacgcggtccacaaggaacgccccttcttc
ggcgaactcgtcaccttcatgacctcgggccccgtcgtcgtgcaggtgctcgaaggcgag
aatgcgatgcagcgcaaccgcgacatcatgggcgcgaccaaccccaaggacgccgcgccc
ggcacgatccgcaaggaactcgccgaaagcatcgaggcgaacacggttcacggttcggac
agcgacgaaaatgctgcgatcgagatcgcctatttcttcaagcccgaagaaatcgtcggc
tga
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