Uncultured Sphingopyxis sp. UC10: SPPYR_1013
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Entry
SPPYR_1013 CDS
T05531
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPPYR_1013 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphu01007
]
SPPYR_1013 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphu03016
]
SPPYR_1013 (aspS)
03029 Mitochondrial biogenesis [BR:
sphu03029
]
SPPYR_1013 (aspS)
Enzymes [BR:
sphu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SPPYR_1013 (aspS)
Amino acid related enzymes [BR:
sphu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SPPYR_1013 (aspS)
Transfer RNA biogenesis [BR:
sphu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SPPYR_1013 (aspS)
Prokaryotic type
Other AARSs
SPPYR_1013 (aspS)
Mitochondrial biogenesis [BR:
sphu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SPPYR_1013 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
SBV32133
UniProt:
A0A1Y5PQ31
LinkDB
All DBs
Position
SPPYR:1121547..1123328
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AA seq
593 aa
AA seq
DB search
MHAYRTHNCGQLRAEDVGQNVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSSDAAFA
TLDGLRAESVVTITGDVVARSAETVNAGLPTGAIEVRARDVAVQSAAVELPMPVAGEQEY
PEDIRLKYRFLDLRRERLHANILLRSNVIASLRRRMVEQGFTEYQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSFVTQDDVFNAIEPVLAGVFEEFANGKSVTPAGSFPRIPYRESMLKYGNDKPDLRNPLI
ITDVSSHFAGSGFGRFADIVAAGDVVRAVPAPGTAEKSRKFFDDMNSWAQSEGFAGLGYA
TRKGGEWGGPIAKNHGPEKMDALAAELGLGPDDGLFFAAGKEAVAAKLAGLARTRVAEQL
DLIDANKFEMCWIVDFPMFEADEDTGKIDFSHNPFSMPQGELEALETKDPLDILAWQYDI
VCNGVELSSGAIRNHRPDIMYKAFEIAGYSQADVDANFSGMINAFKFGAPPHGGSAPGVD
RIVMLLADEPNIREVVVFPMNQKAEDLMMGAPAPVSDKQLKELSIRLVDGPKS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgcacccataactgcggccagcttcgcgccgaggacgtcggccagaat
gtccgcctgtcgggctgggtgcatcgcaagcgcgaccatggcgggctgctcttcgtcgac
ctgcgcgaccattatggcctgacgcagatcgtcgcggactcgagcgacgcggccttcgcc
acgctcgacggcctgcgcgccgaaagcgtcgtgacgatcaccggcgacgtggtcgcgcgc
tcggccgagacggtcaacgcgggcctgccgaccggcgcgatcgaggtccgcgcgcgcgat
gtcgcggtgcagtcggccgccgtcgaactgccgatgccggtcgcgggcgaacaggaatat
cccgaggatatccgcctcaaataccgcttcctcgacctccgccgcgaacggctccacgcc
aacatcctgcttcgctcgaacgtgatcgcgtcgctgcgacgccgcatggtcgaacagggc
ttcaccgaatatcagaccccgatcctcaccgcctcctcgcccgagggcgcgcgcgactat
ctggtgccgagccgcgtccatcccggcaaattctacgcgctgccgcaggcgccgcagatg
ttcaaacagctgttgatggtcgcgggcttcgaccgctatttccagatcgcgccctgcttc
cgcgacgaggacgcgcgcgccgaccgctcgccgggcgaattctaccagctcgatttcgag
atgagcttcgtcacgcaggacgatgtgttcaacgcgatcgaacccgtgctcgccggcgtg
ttcgaagaattcgcgaacggcaagtcggtgacgcccgccggctccttcccgcgcattccg
taccgcgagtcgatgctgaaatacggcaatgacaagcccgaccttcgtaacccgctgatc
atcaccgacgtctcctcgcacttcgcgggatcgggcttcggccgcttcgccgacatcgtc
gccgcgggcgatgtcgtccgcgccgttcccgcgccgggcacggccgagaagagccgcaaa
ttcttcgacgacatgaacagctgggcgcagagcgagggcttcgccggcctcggctatgcg
acgcgcaaaggcggcgaatggggcggtccgatcgccaagaatcatggaccggagaagatg
gacgcgctcgccgccgagctcggcctcggccccgacgacggcctcttcttcgccgcgggc
aaggaagccgtcgcggcgaagctcgcggggctggcgcgcacgcgcgtcgccgagcagctc
gacctcatcgacgcgaacaaattcgaaatgtgctggatcgtcgacttcccgatgttcgag
gccgacgaggacaccggcaagatcgatttcagccacaaccccttctcgatgccgcagggc
gagctcgaagcgctcgaaaccaaggatccgctcgacatcctcgcctggcagtatgacatc
gtctgcaacggcgtcgagctgtcgtcgggcgcgatccgcaaccaccgccccgacatcatg
tacaaggcgttcgagatcgcgggctacagccaagccgacgtcgatgcgaatttcagcggc
atgatcaacgccttcaagtttggcgcgccgccgcacggcggctcggcgccgggcgtcgac
cgcatcgtgatgctgctcgccgacgagccgaacatccgcgaggtcgtcgtcttcccgatg
aaccagaaggccgaggatctgatgatgggcgccccggcgccggtcagcgacaagcagctc
aaggaactcagcatccgcctcgtcgacggcccgaagagctga
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