Uncultured Sphingopyxis sp. UC10: SPPYR_1078
Help
Entry
SPPYR_1078 CDS
T05531
Symbol
ccmF
Name
(GenBank) heme lyase, CcmF subunit
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphu02000
]
SPPYR_1078 (ccmF)
Transporters [BR:
sphu02000
]
Other transporters
Others
SPPYR_1078 (ccmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
Motif
Other DBs
NCBI-ProteinID:
SBV32198
UniProt:
A0A1Y5PQ92
LinkDB
All DBs
Position
SPPYR:1186922..1188889
Genome browser
AA seq
655 aa
AA seq
DB search
MIAELGLALLWIAAALACLSLVAGTLFLRGGPKDLAALVRPASVAQGVLTAAAFGLLIAL
FVRSDMSVELVARNSNSLKPMIFKIAGTWGNHEGSMLLWLMILSLSGGLIAIFERRLRED
TLVATLAAQAALSLGFFAFLLFSSNPFKRLPVAPPDGQGLNPLLQDIGLAFHPPTLYVGY
VGLSVAFSFAVGALITREIGPAFARAMRPWVLGSWIFLTLGITAGSYWAYYELGWGGWWF
WDPVENVSLVPWLAGAALLHSVAVTATRNALRAWTVMLAVIGFSMSMVGTFIVRSGLLTS
VHSFAVDPERGTFLLVLMAIYIGGALTLFALRAGAVAEGKKFALLSREGSLVINNLLLTT
ILALVLLGTLYPIVAEAMGEKISVGPPYYNKVAGPLALILCLVMVAGPLLSWRKDDGKRL
WSRLPLAIFAGAAVLFGLILFGGKVGILPLLGMTVAGIVAVASLAPLWGRNLRRTPLPTW
GMVVAHFGVAVCLAGMGAESAFIKERLVAAAPGDNIKIGDFSVKFAGVKPVAGPNYTAIE
GTLVATTSSGGSFTMMPEARTFPGLMGTAPTETNEAALLTRPGGQLYAVLGQPVTSDDGR
ADRYQIRLWWKPLVWWIWLGGALIAIGAALSLLGRAQLLAIWRARRARKAEERFA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgaactcggtctcgccttgctctggatcgcggcggcgcttgcgtgcctgtcg
ctggtcgcgggaacgctgttccttcgcggcgggccgaaggatctcgcggcgctggtgcgt
cccgcgagtgtcgcgcagggcgtgctcaccgctgccgcgttcggcctgctgatcgcgctc
ttcgtgcggtcggacatgtcggtcgaactcgtcgcgcgcaacagcaacagcctgaagccg
atgatcttcaagatcgcggggacgtggggcaaccatgaggggtcgatgctgctgtggctg
atgatcctgtcgctgtcgggcgggctgatcgcgattttcgagcggcggctgcgcgaggat
acgctggtcgcgaccctcgcggcgcaggcggcgctcagcctcgggttcttcgctttcctg
cttttctcctccaacccgttcaagcggctgccggtggcgccgcccgacgggcaggggctc
aacccgctcttgcaggacatcggcttggccttccacccgccgacgctttacgtcggctat
gtcgggttgtcggtcgcgttcagctttgccgtcggcgcgctgatcacgcgcgagatcggc
ccggcgttcgcgcgcgcgatgcggccgtgggtgctcgggagctggatttttctgaccctc
ggtatcaccgcgggcagctattgggcctattatgagctcggctggggcggctggtggttc
tgggatccggtcgagaatgtctcgctggtgccgtggctcgcgggcgcggccttgctccat
tcggtcgcggtgaccgcgacgcgcaatgcgctgcgcgcatggacggtgatgctcgcggtg
atcggtttctcgatgtcgatggtcgggaccttcatcgtgcggtcggggctcttgacgagc
gtccatagtttcgcggtcgatcccgagcgcggcaccttcctgctcgtgctgatggcgatc
tatatcggcggcgcgctgaccctgttcgcgctgcgcgccggggcggtcgccgagggcaag
aaattcgcgctcttgagccgcgaaggctcgctggtgatcaacaatctgctgctcacgacg
atcctcgcgctcgtgctcctcggcacgctctacccgatcgtcgccgaggcgatgggcgag
aagatttcggtcgggccgccctattacaacaaggtcgcggggccgctggcgctgatcctc
tgccttgtcatggtcgcagggccgctgttgagctggcgcaaggatgacgggaaaaggcta
tggtcgcggctgccgctcgcgatctttgcgggcgcggcggtgctgttcgggctgatcctg
ttcggcggcaaggtcggcatcctgcccctgctcggcatgacggtcgcgggaatcgtcgcg
gtcgcgagccttgcgcccttgtgggggcgcaatctccgccgcacgccgctgccgacgtgg
ggcatggtcgtcgcgcatttcggcgtcgcggtgtgcctcgccggcatgggcgccgaaagc
gccttcatcaaggaacggctagtcgcggcggctcccggagacaatatcaagatcggcgat
ttttcggtgaagttcgccggggtgaagccggtcgcggggccgaattataccgcgatcgag
gggacgctggtcgcgacgacctcgtcgggcggcagcttcacgatgatgcccgaggcgcgc
acctttccggggctgatgggcaccgcgccgaccgagaccaacgaggcggcgttgctgacg
cggccgggcggtcagctttatgccgtgctcggccagccggtaacgagcgacgacggccgc
gccgaccgctaccagatccgcctttggtggaagccgctggtatggtggatctggctcggc
ggcgcgctgatcgcgatcggtgccgcgctgtcgctgctcgggcgcgcgcaattgctggcg
atctggcgcgcgcgccgggcccgcaaggcagaggaacgtttcgcatga
DBGET
integrated database retrieval system
