Uncultured Sphingopyxis sp. UC10: SPPYR_1229
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Entry
SPPYR_1229 CDS
T05531
Symbol
gabD
Name
(GenBank) putative succinate-semialdehyde dehydrogenase [NADP(+)]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00250
Alanine, aspartate and glutamate metabolism
sphu00310
Lysine degradation
sphu00350
Tyrosine metabolism
sphu00650
Butanoate metabolism
sphu00760
Nicotinate and nicotinamide metabolism
sphu01100
Metabolic pathways
sphu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SPPYR_1229 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SPPYR_1229 (gabD)
00310 Lysine degradation
SPPYR_1229 (gabD)
00350 Tyrosine metabolism
SPPYR_1229 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SPPYR_1229 (gabD)
Enzymes [BR:
sphu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SPPYR_1229 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SPPYR_1229 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SPPYR_1229 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
SBV32349
UniProt:
A0A1Y5PQS9
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Position
SPPYR:complement(1317517..1318884)
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AA seq
455 aa
AA seq
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MIATIDPATGETLARFDAHTPAEIDARLERAARAQDAWRWRSAEERAAILPRLAALLRAE
KDRLAALITCEMGKPIAEAAAEVEKCALNCDFYAERAPAMLADAPVAAAPGTTLAFEPLG
VILAIMPWNYPLWQVVRFLAPALAAGNGAILKHAANVPQSALALERLVAEAGFPEGLFAN
LFVEPVDIAAVIADPRIAGVTLTGSTEVGAIVAGQAGAALKKQVLELGGSDPFVVLADAD
LERAARTAVTARFTNAGQSCVNAKRFIVEASVADAFADHFLKGITELKLGDPRDTATTLG
PLARGNLRAAIDAQVQRSIASGAQLRTGGTIPGGPGFYYPATLLDHVAPGMAAFDEETFG
PAAAIVRAHDADEAIALANRTCFGLGASVWTTDIDRGRLLARRVDAGAVFVNAMVASDPR
VPFGGIKRSGYGRELGEAGMKEFTNMKTIRVADAI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgacaatcgaccctgcgaccggcgagacgctcgcgcgcttcgacgcccatacc
cccgccgaaatcgatgcccggctcgaacgcgcggcgcgcgcgcaggacgcatggcggtgg
cgctccgccgaagagcgcgcagcgatactcccgcgcctcgccgctttgcttcgcgccgaa
aaggacaggctcgcagcgctgatcacctgcgaaatgggcaagccgatcgccgaggcagcg
gcggaagtcgagaaatgcgcactcaactgcgatttctatgccgaacgcgctcccgcgatg
ctcgccgacgcgcccgtcgccgcggcgcccggcaccacgctcgccttcgagccgctcggc
gtgatccttgcaatcatgccgtggaattatccgctgtggcaggtcgtccgcttcctcgcc
cccgcgctcgccgcgggcaatggcgcgatcctcaaacacgccgcgaatgttccgcaatcg
gcgctcgcactcgaacgcctggtcgccgaagcaggttttcctgagggcttgttcgcgaac
ctgttcgtcgagcccgtcgatatcgccgcagtcatcgcggacccgcgcatcgccggcgtc
acactcaccggctcgaccgaagtcggcgcgatcgtcgccggacaggcgggcgcggcgctc
aagaagcaagtgctcgaactcggcggttcggacccgttcgtcgtgctggccgacgccgat
ctcgaacgcgccgcgcgcaccgccgtgaccgcacgcttcaccaacgccgggcagagctgc
gtcaacgccaagcgcttcatcgtcgaagcgagcgtcgccgatgcctttgccgaccacttc
cttaagggcatcaccgagctcaagctcggcgatccgcgcgataccgcgacgaccctgggg
ccgctcgcgcgcggcaatctgcgcgccgcgatcgacgcccaggtccagcgcagcatcgct
tcgggcgcgcagctccgcaccggtgggacgatacccggcggtccaggattctattatccc
gcgacgttgctcgaccatgtcgcgcccggaatggcggcgtttgacgaggaaaccttcggc
cccgccgccgcgatcgtgcgtgcacatgatgccgacgaagcgatcgcactcgccaaccgc
acctgcttcggcctcggtgcctcggtctggaccaccgacatcgaccgcggcagattgctc
gcgcggcgggtcgacgccggcgcggtgttcgtcaacgcgatggtcgcctccgacccgcgc
gtgccgttcggcgggatcaagcgctcgggttacggccgcgagctcggcgaggcgggaatg
aaggagttcaccaacatgaagaccatccgcgtagcggacgccatatga
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