Uncultured Sphingopyxis sp. UC10: SPPYR_1259
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Entry
SPPYR_1259 CDS
T05531
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphu03032
]
SPPYR_1259 (hup)
03036 Chromosome and associated proteins [BR:
sphu03036
]
SPPYR_1259 (hup)
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_1259 (hup)
DNA replication proteins [BR:
sphu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SPPYR_1259 (hup)
Chromosome and associated proteins [BR:
sphu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SPPYR_1259 (hup)
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SPPYR_1259 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Phage_cement_2
DUF2267
Peptidase_C23
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
SBV32379
UniProt:
A0A1Y5PQW3
LinkDB
All DBs
Position
SPPYR:complement(1356638..1356913)
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AA seq
91 aa
AA seq
DB search
MNHAELSDSVAAALGTSKADGKKTVEAVFAAIADAAAKGEEVSVNGFGKFKVKKSAAREG
RNPSTGATIQIAASKKLGFSAAKAVKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgccgaattgtccgacagcgtcgccgccgcgctcgggacgagcaaggccgac
ggcaagaagaccgtcgaggccgtcttcgccgcgatcgcggacgccgctgccaagggtgaa
gaagtgtcggtgaacggcttcggcaagttcaaggtcaagaaatcggccgcacgcgaaggc
cgcaatccttcgaccggcgcgacgatccagatcgcggcttcgaagaagctcggcttctcg
gcggccaaagcggtcaaggacaagctgaacggctga
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