Uncultured Sphingopyxis sp. UC10: SPPYR_1342
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Entry
SPPYR_1342 CDS
T05531
Symbol
rpsA
Name
(GenBank) 30S ribosomal subunit protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SPPYR_1342 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sphu03011
]
SPPYR_1342 (rpsA)
Ribosome [BR:
sphu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SPPYR_1342 (rpsA)
Bacteria
SPPYR_1342 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
SH3_16
CvfB_2nd
Motif
Other DBs
NCBI-ProteinID:
SBV32462
UniProt:
A0A1Y5PR03
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All DBs
Position
SPPYR:complement(1448105..1449817)
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AA seq
570 aa
AA seq
DB search
MASTAFPSRDDFAAMLDESLGGADGGFEGRVVKGTVTAIENDLAVIDIGLKSEGRVPLRE
FAMPGQKADLNVGDEVEVYVDRVENANGETMLSRDRARREAAWDRLEEEFNKEARVEGVI
FGRVKGGFTVDLGGAVAFLPGSQVDIRPVRDVGPLMDLPQPFQILKMDRRRGNIVVSRRA
ILEETRAEQRSGLIQNLEEGQIIEGAVKNITDYGAFVDLGGIDGLLHVTDMSYKRVNHPS
EVINIGDTVRVQIIRINRDTQRISLGMKQLESDPWEGVAAKYPVGAKLTGTVTNITDYGA
FVELEAGIEGLVHVSEMSWVKKNVHPGKIVSTSQEVDVIVLEVDSDKRRISLGLKQAQSN
PWGAFAEAHPVGSVVEGEVKNATEFGLFVGLPGDVDGMVHMSDIAWGISGEEALHLHRKG
ESVQVVVLDVDVEKERISLGIKQLEKGAPAVGGGVSAAGSVKKNDIVTVTVLEVRDNGLE
VQAGEDGATGFIKRADLGRDRDEQRAERYQVGQKFDAMVIGFDRSKKPNFSVKAMQIAEE
KEAVAQYGSSDSGASLGDILGEALKAGKKD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacggcttttccgtcgcgcgacgatttcgccgcgatgctcgacgaatcgctg
ggtggtgctgatggcggctttgaaggccgcgtcgtcaagggcaccgtgaccgcgatcgaa
aacgacctggcagtgatcgacatcggcctgaagagcgaaggccgcgtgccgcttcgcgaa
ttcgcgatgccgggccagaaggccgacctcaacgtcggcgacgaagtcgaagtctatgtc
gaccgcgtcgaaaacgccaatggcgaaaccatgctctcgcgcgaccgtgcgcgccgcgaa
gccgcctgggaccgcctcgaagaagaattcaacaaggaagcccgcgtcgaaggcgtcatc
ttcggccgcgtcaagggcggcttcaccgtcgacctcggcggcgccgtggccttccttccg
ggcagccaggtcgacatccgccccgtgcgcgacgtcggcccgctcatggacctgccgcag
ccgttccagatcctcaagatggatcgccgccgcggcaacatcgtcgtgtcgcgccgcgcc
atcctcgaggaaacgcgcgccgaacagcgttcgggcctgatccagaacctcgaagaaggc
cagatcatcgaaggcgcggtcaagaacatcaccgattatggtgcgttcgtcgacctcggc
ggcatcgacggcctgctccatgtcaccgacatgagctacaagcgcgtcaaccacccgagc
gaagtcatcaacatcggtgacacagtccgcgtccagatcatccgcatcaaccgcgacacg
cagcgcatcagcctcggcatgaagcagctcgaaagcgatccgtgggaaggcgtcgccgcc
aaatatccggtcggcgcgaagctcaccggcacggtcacgaacatcaccgattacggcgcg
ttcgtcgaactcgaagccggcatcgaaggcctggtccacgtcagcgaaatgtcgtgggtc
aagaagaacgtccaccccggcaagatcgtttcgacgagccaggaagtcgacgtcatcgtc
ctcgaagtcgacagcgacaagcgccgcatttcgctcggtctcaagcaggcccagtcgaac
ccctggggcgcctttgcggaagcccacccggtcggctcggtcgtcgaaggcgaagtcaag
aacgcgaccgaattcggtctgttcgtcggcctgccgggcgacgttgacggcatggtccac
atgtcggacatcgcgtggggcatctcgggcgaagaagcgctgcacctccaccgcaagggc
gagagcgtgcaggttgtcgtcctcgacgtcgatgtcgaaaaggaacgcatcagcctcggc
atcaagcagcttgaaaagggcgctccggccgtcggcggcggcgtcagcgccgcgggttcg
gtgaagaaaaacgacatcgtcaccgtcacggtcctcgaagtccgcgacaatggcctcgaa
gtgcaggccggcgaagatggcgccaccggcttcatcaagcgcgccgaccttggccgcgac
cgcgacgaacagcgcgccgaacgctatcaggtcggccagaagttcgacgcgatggtcatc
ggtttcgaccgttcgaaaaagccgaacttctcggtcaaggcgatgcagatcgccgaagag
aaggaagccgtcgcgcagtacggctcgtcggactcgggtgcgtcgcttggcgacatcctc
ggcgaagcgctgaaggccggcaagaaggactga
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