Uncultured Sphingopyxis sp. UC10: SPPYR_1599
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Entry
SPPYR_1599 CDS
T05531
Name
(GenBank) Cell division cycle protein 48 homolog AF_1297
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SPPYR_1599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphu03019
]
SPPYR_1599
03009 Ribosome biogenesis [BR:
sphu03009
]
SPPYR_1599
04131 Membrane trafficking [BR:
sphu04131
]
SPPYR_1599
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphu04147
]
SPPYR_1599
Messenger RNA biogenesis [BR:
sphu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SPPYR_1599
Ribosome biogenesis [BR:
sphu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SPPYR_1599
Membrane trafficking [BR:
sphu04131
]
SNARE
SNARE associated proteins
Others
SPPYR_1599
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SPPYR_1599
Exosome [BR:
sphu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPPYR_1599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_33
AAA_5
CDC48_2
AAA_2
AAA_14
TIP49
IstB_IS21
AAA_18
nSTAND3
Mg_chelatase
AAA_28
NPHP3_N
ABC_tran
Vps4_C
RNA_helicase
Sigma54_activat
DUF815
AAA_7
AAA_24
AAA_17
AAA_3
AAA_30
ATPase
Zeta_toxin
AAA_11
AAA_lid_PRS2_C
AAA_19
AAA_25
TsaE
Parvo_NS1
Viral_helicase1
NB-ARC
Sigma54_activ_2
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
SBV32719
UniProt:
A0A1Y5PRU6
LinkDB
All DBs
Position
SPPYR:1701477..1703798
Genome browser
AA seq
773 aa
AA seq
DB search
MADAAVKEKHVKLQVANSRAEESGGGIARIPRSAMAELGVTEGDIIQISGKRQTASRIVA
PYTEDEGLEVIRLDGLQRANAGAGAGDMVMLSRVETRPATRVVFAPAQENLRLQGSANAL
KRSFFGRPLVAGDTVATAGQQRLPSGDMPPQLRQMLNAPAYALAEVRLLVVSATPKGVVF
IDENTEIELLPEYQEPQDARRTDVTYDDLGGLGETIDQLREMVELPLRYPELFRRLGVDP
PRGVLLHGPPGTGKTRLARAVANESEAQFFLINGPEIMGSAYGESEKRLRDIFEQAAKSA
PSILFIDEIDSIAPKRGQVQGEAEKRLVAQLLTLMDGLEPRTNLVVIAATNRPDAIDEAL
RRPGRFDREIVIGVPDEKGRREILGIHTRGMPLGDNVDLDELSRTTFGFVGADMAALTRE
AAIEAVRRIMPKLNLEEGTIPPEVLEELRVTREDFNNALKRVQPSAMREVMVQAPKTRWS
DIGGLDAARDKLIEGIELPLKNPAAFRRLGIRPAKGFLLYGPPGTGKTLLAKAAARESDA
NFISIKSSDLLSKWYGESEQQIARLFQRARAVAPTIIFIDELDSLVPARGSGTSGEPQVT
ERVVNTILAEMDGIEEMQSVVVIGATNRPNLIDPALLRPGRLDELIYVSVPNAEGRKRIL
EIQTAKMPLADDVDLGVLAGKSDRFTGADLEDLTRRAGLAALKRSMGSETVTMEDFETAL
KDTRASVTEAMERDYEKIQGEIKQAAMSVDPIGFFAPGMLKPSRERKHEEPND
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggccgatgcggcggtaaaagaaaaacatgtgaaactgcaggtggcgaattcgcgcgcc
gaggaaagcggcggcggcatcgcccgcattccgcgctcggcgatggctgaactcggcgtg
accgagggcgatatcatccagatcagcggcaagcggcagacggcctcgcgcatcgtcgcg
ccttatactgaggatgaggggctggaggtcatccggctcgacggcttgcagcgcgccaat
gccggcgcaggcgccggcgacatggtgatgctcagccgtgtcgagacgcgcccggcgacc
cgtgtggtgttcgcgccggcgcaggagaatcttcgccttcagggttcggccaacgcgctg
aagcgcagcttcttcggccgtccgcttgtcgcaggggatacggtcgcgaccgcggggcag
cagcggttgccgtcgggcgacatgccgccgcagcttcgccagatgctcaacgcgcctgcc
tatgcgctcgccgaggtgcgcctgctcgtcgtctccgcgacccccaagggcgtcgtcttc
atcgacgagaataccgaaatcgaattgctccccgaatatcaggagccgcaggacgcgcgc
cgcaccgacgtcacctatgacgatctcggcgggctgggcgagacgatcgaccagctgcgc
gagatggtcgagctgccgctgcgctatcccgagctgttccgtcggctgggcgtcgatccg
ccgcgcggggtgctgctgcacggcccgccggggacgggcaagacgcggctcgcgcgcgcg
gtcgccaatgaaagcgaagcgcaattcttcctgatcaatgggcccgaaatcatggggtcc
gcttatggcgaatccgaaaagcggctgcgcgacatcttcgagcaggcggccaagtccgcg
ccgtcgatcctgttcatcgacgagatcgattcgatcgcaccgaagcgtgggcaggtgcag
ggtgaggcggaaaagcggctcgtggcgcagttgctgacgctgatggacgggctggagccg
cgaacgaatctggtggtgatcgcggcgaccaatcgcccagacgcgatcgacgaggcgctg
cgccgtccgggtcgcttcgaccgcgagattgtgatcggtgtccccgacgaaaaggggcgg
cgcgagatattgggcatccacacgcgcggcatgccgctgggcgacaatgtcgatctcgac
gagctgtcgcgcacgaccttcggcttcgtcggcgctgatatggcggcgctgacccgcgaa
gcggcgatcgaggcggtgcgccggatcatgcccaagctcaatctcgaggaagggacgatc
ccgcccgaggtgctcgaggaactgcgcgtgacgcgcgaggacttcaacaatgcgttgaaa
cgcgtccagccctcggcgatgcgcgaggtgatggtgcaggcgcccaagacgcgctggagc
gacatcggcgggctcgacgcggcgcgcgacaagctgatcgaggggatcgagctgccgctg
aagaaccccgcggcgtttcggcgcctgggtatccgtccggccaagggtttcttgctctat
ggtccgcccggaaccggcaagaccttgctcgccaaggccgcagcgcgcgaatcggatgcg
aacttcatctcgatcaaatcgtcggacctcttgtcgaaatggtatggtgagagcgagcaa
cagatcgcgcggctgttccagcgcgcacgtgccgtcgcgccgacgatcatcttcattgac
gaactcgacagcctcgtgcccgcccgcggcagcgggacgtccggcgagccgcaggtcacc
gagcgcgtcgtcaacacgattctcgccgagatggacgggatcgaggagatgcagtcggtc
gtcgtcatcggcgcgaccaatcgcccgaacctgatcgacccggcgctgctgcgcccgggg
cggctcgacgaactgatctacgtctctgtgcccaatgccgaagggcgcaaacgcatcctc
gaaatccagacggcgaagatgccgctcgcggacgacgtcgaccttggcgtcctggccgga
aagtccgaccgtttcaccggcgccgacctcgaggatctgacccggcgcgcagggcttgcc
gcgctcaagcgttcgatgggcagcgaaacggtgacgatggaagatttcgagacggcgctg
aaggacacgcgcgcatcggtgaccgaagcgatggagcgggattatgaaaagatccagggc
gagatcaaacaggcggcgatgagcgtcgatccgatcggcttcttcgcgcccggcatgctc
aagccttcccgtgagcgcaagcatgaggaacccaacgactag
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