Uncultured Sphingopyxis sp. UC10: SPPYR_1663
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Entry
SPPYR_1663 CDS
T05531
Name
(GenBank) Polysaccharide biosynthesis protein CapD-type
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00541
O-Antigen nucleotide sugar biosynthesis
sphu00552
Teichoic acid biosynthesis
sphu01100
Metabolic pathways
sphu01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SPPYR_1663
00552 Teichoic acid biosynthesis
SPPYR_1663
Enzymes [BR:
sphu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SPPYR_1663
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding
DapB_N
GFO_IDH_MocA
3Beta_HSD
PglD_N
adh_short
Rho_N
Motif
Other DBs
NCBI-ProteinID:
SBV32783
UniProt:
A0A1Y5PS03
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Position
SPPYR:complement(1766197..1768143)
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AA seq
648 aa
AA seq
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MRIQNKQAWLAIPMQILRMALNWSRDQRRLLAAGMDGVLCVIAVWIAYSLRLGVWELFSR
PVLTFAAATLLFWYPIAYLTGVYRSLIRFSGARTIANLAIACTILAGPLMIAFVLFRFPE
VPRTLTILHPIIFLLLLASSRIVIRFALLDLLHSVSPDARRVIIYGAGRAGQQLALSLRH
EPQIYLVGFVDDDLRLAGQRLDGVPVFSSEQLGKLLDDTDVDEVLLAIPSASRMRRREII
ERLQEEQIYVRSLPSLSNIIEGSVTVNDLREIQIEELLGREAVAPNEVLMGKTIVGKTVL
VSGAGGSIGSELCRQILRCHPARLILLEQSEFALYAIEQELTEMTRAMDADIPIILELGN
IAERSTPMRIYRNHRPDTVFHAAAYKHVPLVEANPISGVRNNVLGTLYSVEAAEANGVSH
FTLISTDKAVRPTNIMGASKRVCELILQARAERPDVATVFSMVRFGNVLGSSGSVVPLFK
AQIAAGGPVTITHAKITRYFMTIPEASQLVIQASAMARGGEVFVLDMGQPVRIIDLARSM
IQLSGLSVRDTDRPEGDIEIVETGLRPGEKLYEELLIGDNPEPTNHPRILRARESRWPWK
ELEAELQALETIIRGSGDPALAIRIIGKLVPEYTPDTAWAARISTATS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatccagaacaaacaggcctggctggcgatcccgatgcaaattctgcgtatggcg
ctcaactggtcgcgcgatcagcggcgcctgctcgccgcgggcatggacggcgtgctttgc
gtcatcgcggtctggatcgcctattcgctgcggctcggcgtgtgggaacttttctcgcgc
ccggtgctgacctttgccgccgcgacattgctgttctggtatcccatcgcctatctgacc
ggcgtctaccgttcgttgatccgcttttcgggcgcgcggacgatcgccaatctcgccatt
gcctgcacgatcctcgccggtccgctgatgatcgccttcgtgcttttccgctttcccgaa
gtgccccggacgctcaccatcctgcatccgatcatatttctgctgctccttgcatcgagc
cggatcgtcatccggttcgcgctgctcgacctgttgcacagcgtatcgcccgacgcgcgc
cgcgtgatcatctatggcgccgggcgcgcgggacagcagctcgccctgtcgctgcgtcac
gagccgcaaatctatctcgtcggcttcgtcgatgacgacctgcgtctcgccgggcagcgg
ctcgacggcgttccggtcttcagctccgaacaattgggcaagctgctggacgataccgac
gtcgacgaggttctgctcgccatcccgagcgcgtcgcggatgcgccgccgcgaaatcatc
gagcgcctgcaggaagagcaaatctacgtccgttcgctaccgagcctctcgaacatcatc
gaaggttcggtcaccgtcaacgacctgcgcgagattcagatcgaggaactcctcggccgc
gaggcggtggcgccgaacgaggtgctgatgggcaagacgatcgtcggcaagacggtgctg
gtatcgggtgccggcggctcgatcggcagcgaattatgccgccagatcctgcggtgccat
ccggcgcgcctgatcctcctcgaacaatccgaattcgcgctctatgcgatcgagcaggaa
ttgacggagatgacgcgcgcgatggacgccgacatcccgatcatcctcgaactcggcaat
attgccgagcgatcgacgccgatgcgcatctatcgcaaccaccggcccgacaccgtcttc
cacgccgcggcgtacaaacatgttccgctcgtcgaggccaatccgatttcgggcgttcgc
aacaatgtcctcggaacactctacagcgtcgaggccgccgaggccaatggcgtatcccat
ttcaccttgatcagcaccgacaaggcggtgcgtccgaccaatatcatgggcgcatcgaag
cgcgtgtgcgaactgatccttcaggcgcgcgccgagcgccccgatgtcgccaccgtgttc
agcatggtccgtttcggcaatgtgctcggatcgagcggctcggtggttcctctgttcaag
gcgcagatcgccgccggcgggccggtgacgattacccatgcgaagatcacgcgctatttc
atgaccattcccgaggcatcgcaactcgtcatccaggcaagcgcgatggcgcggggcggc
gaagtcttcgtgctcgatatggggcaacccgttcgtatcatcgacctcgcgcgcagcatg
atccagctgtcgggcctcagcgtccgcgacaccgaccgccccgaaggcgacatcgagatt
gtcgaaacggggctgcggccgggcgagaagctctatgaggagctgctgattggcgacaat
cccgagccgaccaaccacccccgcatccttcgcgcccgcgaaagccgctggccgtggaag
gaattggaggcggagcttcaggctctcgaaacgatcatccgcggaagcggcgaccccgcc
ctggcaattcgcatcatcggcaagctggtgcccgaatatacccccgacacggcgtgggcc
gcgcgaatttcgaccgcgacctcctag
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