Uncultured Sphingopyxis sp. UC10: SPPYR_1723
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Entry
SPPYR_1723 CDS
T05531
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPPYR_1723 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_1723 (recO)
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPPYR_1723 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPPYR_1723 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
SBV32843
UniProt:
A0A1Y5PS61
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All DBs
Position
SPPYR:1832022..1832759
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AA seq
245 aa
AA seq
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MAGLTASAIVCAVRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNLVALELR
ARTEEQLGGATVELLESRAPLLAEPLAAAAIDWATSLTAATLPENQPYPALYAALSAVLD
AIGVAASARQWAAALARYELLLLAELGFGLNLEECVVTGSPDDLAFVSPKSGAAVGADAA
AGYEERLFRLPPFLRGRDAGPPMGDVLDGLRITGHFIDRDLLDGRNRDLLGSRERLIDRL
KRAVA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
ttggccggcctgacggcatcggcgatcgtctgcgcggtgcgcgcgcatggcgagcatggc
gcgatcctgcgcgcgttgacgcacgaagccgggctggtcgcgggctatgtgcgcggcggg
cgttcgcggcggctgcgcccgatcctgatgccgggcaatctggtggcgctcgaactacgc
gcgcgaaccgaagagcaattgggcggcgcgacggtcgagctgctggaaagccgcgcaccg
ttgcttgccgagccgctcgcggccgccgcgatcgactgggcgacgagccttaccgccgcg
acgcttcccgaaaaccagccctatccggcgctctatgcggcgctgtcggcggttctcgac
gcgatcggcgtcgcggcgtcggcgcgccaatgggctgcggcgctggcgcgctatgaactg
ctgcttctcgccgagctgggctttgggctgaacctggaggaatgcgtcgtaacgggctcg
ccggacgatctcgccttcgtcagccccaagtcgggcgcggcggtaggcgccgacgcggcg
gcgggttatgaagagcgcctgttccgcctgccgcctttcctgcgggggcgggacgcaggt
ccgccgatgggcgatgtgctcgatggtctccgcatcaccggacattttatcgaccgcgac
ctcctcgacggccgcaaccgcgacttgctggggtcaagggaaagattgatcgaccggctc
aagagggcggttgcgtga
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