Uncultured Sphingopyxis sp. UC10: SPPYR_1825
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Entry
SPPYR_1825 CDS
T05531
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphu03032
]
SPPYR_1825 (gyrA)
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_1825 (gyrA)
Enzymes [BR:
sphu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SPPYR_1825 (gyrA)
DNA replication proteins [BR:
sphu03032
]
Prokaryotic type
DNA Topoisomerases
SPPYR_1825 (gyrA)
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SPPYR_1825 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
SBV32945
UniProt:
A0A1Y5PWD7
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All DBs
Position
SPPYR:complement(1941198..1943921)
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AA seq
907 aa
AA seq
DB search
MQPSDDGVSPINIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILYAAQEGGFVPG
RPYKKSAKIVGDVMGNYHPHGDSAIYDALARMTQDWSLRVPLIDGQGNFGSMDPDPPASM
RYTEARLAKTAMVLLNDLDKDTVDFQPNYDASRDEPTVLPARFPNLLVNGAGGIAVGMAT
NIPPHNLGEVIDATLAMIDRQLEGGPPVTLEELMAIVPGPDFPTGAMMLGQGGARSAYAT
GRGSIMMRSTHVIEEGRNDRQSIVLTSIPFQVGKSGLVEKIAEAARDKRVEGVADIRDES
NREGVRVVIELKRDATAEVVLNQLWRHTPAQSSFPANMLAIRGGRPEMLGLQDILTAFIA
FREEVITRRCKFELAKARDRAHILLGLVVAVSNLDEVVRIIRGSPSPAAAREALLAREWP
IGEIAPYIRLVEAIEGEMEESATYRLSEIQVKAILDLRLHRLTALGRDEIGKELGELAAE
IEELLSILADRVKLYGVMREELVAVRDEFATPRKTLVAPAADGIDDEDLIEREEMVVTVT
LDGYIKRTPLDTFRAQRRGGKGRAGMATKDEDVVTELFVTSTHTPVLFFSTAGKVYRMKV
WRLPEGGPATRGRPMINLLPLAQGETISTVLPLPEDEAEWGKLHVMFATAKGSVRRNSMD
AFTNVPSNGKIAMKFEGEDEDDRLIGVALLDESDDVLLATRQGKAIRFAGDDVREFQSRN
STGVRGMRLADGDEVISLSILHRGGMRDQDEREDYLRFAPWKAEKEGAPEMTAERFAELA
GREQFILTVCANGYGKLSSAYEYRRTGRGGQGITNIDNIARNGPVVASFPATQAHQLMLV
TDQAKLIRMGLDSLRVIGRGSAGVRLFDVAKDEHVVSAALIEEGDEEAAEGNEEAEAETP
ATEASPE
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgtccgacgacggcgtttcgccgatcaacatcgtcgacgaaatgaagacaagc
tacctcgattacgcgatgagcgtgatcgtcagccgcgcgctccccgacgtgcgcgacggg
ctgaagccggtgcatcgccgcatcctctatgcggcgcaggaaggcggcttcgtcccgggg
cgcccctacaagaaatcggcgaagatcgtcggcgacgtgatgggcaattatcacccgcac
ggcgacagcgcgatctacgacgcgctcgcgcgcatgacgcaggactggtcgctacgcgtg
cccctgatcgacggtcagggcaatttcggctcgatggaccccgatccgccggcgtcgatg
cgctacaccgaagcgcgcctcgccaagaccgcgatggtgctgctgaacgatctcgacaag
gatacggtcgacttccagcccaattatgacgcgagccgcgacgagccgacggtgctcccg
gcgcgcttcccgaacctgctcgtcaacggcgcgggcggcatcgcggtcggcatggcgacc
aacatcccgccgcacaatctgggcgaagtgatcgacgcgacgctcgcgatgatcgaccgt
cagctcgaaggcgggccgccggtcacgctcgaggaactgatggcgatcgtccccggcccc
gatttcccgaccggcgcgatgatgctcggccagggcggtgcgcggagcgcctatgcgacc
gggcgcggctcgatcatgatgcgctcgacgcatgtaatcgaggaaggcaggaacgaccgc
caatcgattgttttgacgtcgattccgttccaggtcggcaagtcgggcctcgtcgagaag
atcgccgaggcggcgcgcgacaagcgcgtcgagggcgtcgccgacattcgcgacgaatcg
aaccgcgaaggcgtccgcgtcgtcatcgagctgaagcgcgacgcgaccgccgaggtcgtc
ctgaaccagctctggcgccacaccccggcgcagtcgagcttccccgcgaacatgctcgcg
atccgcggcggccgccccgaaatgctcgggttgcaggacatcctgaccgccttcatcgcc
ttccgcgaagaggtcatcacccgccgctgcaagttcgaactcgccaaggcgcgcgatcgc
gcgcatatcttgctcggtctcgtcgtcgcggtgtcgaacctcgacgaggttgtccgcatc
atccgcggctcaccctcgcccgccgccgcccgcgaagccctgctcgcgcgcgaatggccg
atcggagagatcgcgccctacatccgtctcgtcgaggcgatcgagggcgagatggaagag
agcgcgacctatcgcctgtccgaaatacaggtgaaggcgatccttgacctccgcctccac
cgcctcaccgcacttggccgcgacgaaatcggcaaggaactcggtgagttggcggccgag
attgaggaactgctttcgattctcgccgaccgcgtcaaactctatggcgtgatgcgcgag
gagctggtcgcggtgcgcgacgaattcgcgacgccgcgcaagacgctcgtcgcccccgcc
gccgacgggatcgatgacgaggatctgatcgagcgcgaggagatggtcgtcaccgtcacc
ctcgacggctatatcaagcgcaccccgctcgacacgttccgggcacaaaggcgcggcggc
aagggccgcgccggcatggcgacgaaggacgaggatgtcgtcaccgagctgttcgtcacc
tcgacgcatacgccggtgctcttcttctcgaccgcgggcaaggtctatcgcatgaaggtg
tggcgcctgcccgagggcggacccgcgacgcgcggccgcccgatgatcaacctgctgccg
ctcgcgcagggcgaaaccatctcgaccgtgctgccgctgcccgaggacgaggccgaatgg
ggcaagctgcacgtcatgttcgcaaccgcgaagggcagcgtgcgtcgtaacagcatggac
gctttcaccaacgtgccctcgaacggcaagatcgcgatgaagttcgagggcgaggacgag
gacgaccggctgatcggcgtcgcgctgctcgacgagagcgacgacgtgctgctcgcgacg
cgtcagggcaaggcgatccgcttcgccggcgacgacgtccgcgagtttcagagccgcaat
tcgaccggtgtccgcgggatgaggcttgccgatggcgacgaggtgatctcgctgtcgatc
ctgcatcgcggcggcatgcgcgatcaggacgagcgggaggattatctgcgctttgcgccg
tggaaggccgaaaaggaaggcgcgcccgagatgaccgccgaacgcttcgccgaactggcg
gggcgcgagcaattcatcctcaccgtctgcgccaatggctatggcaagctgtcgtcggcc
tatgaatatcgccgcaccggtcgcggcggccagggaatcaccaacatcgacaatatcgcc
cgcaacgggccggtcgtcgccagtttccccgcgacgcaggcgcatcagctgatgctcgtt
accgatcaggcgaagctcattcgcatggggctcgattcgctgcgcgtcatcggccgcggc
agcgcgggcgtgcggctgttcgatgtcgcaaaggacgagcatgtcgtttcggcggcactg
atcgaggaaggcgacgaggaagcggcggaaggcaatgaagaggccgaagccgaaacgccc
gcgacggaggcttccccggaatga
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