KEGG   Uncultured Sphingopyxis sp. UC10: SPPYR_1907
Entry
SPPYR_1907        CDS       T05531                                 
Symbol
lpd
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sphu  Uncultured Sphingopyxis sp. UC10
Pathway
sphu00010  Glycolysis / Gluconeogenesis
sphu00020  Citrate cycle (TCA cycle)
sphu00260  Glycine, serine and threonine metabolism
sphu00280  Valine, leucine and isoleucine degradation
sphu00310  Lysine degradation
sphu00380  Tryptophan metabolism
sphu00620  Pyruvate metabolism
sphu00630  Glyoxylate and dicarboxylate metabolism
sphu00640  Propanoate metabolism
sphu00670  One carbon pool by folate
sphu00785  Lipoic acid metabolism
sphu01100  Metabolic pathways
sphu01110  Biosynthesis of secondary metabolites
sphu01120  Microbial metabolism in diverse environments
sphu01200  Carbon metabolism
sphu01210  2-Oxocarboxylic acid metabolism
sphu01240  Biosynthesis of cofactors
Module
sphu_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sphu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sphu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sphu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SPPYR_1907 (lpd)
   00020 Citrate cycle (TCA cycle)
    SPPYR_1907 (lpd)
   00620 Pyruvate metabolism
    SPPYR_1907 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    SPPYR_1907 (lpd)
   00640 Propanoate metabolism
    SPPYR_1907 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SPPYR_1907 (lpd)
   00280 Valine, leucine and isoleucine degradation
    SPPYR_1907 (lpd)
   00310 Lysine degradation
    SPPYR_1907 (lpd)
   00380 Tryptophan metabolism
    SPPYR_1907 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SPPYR_1907 (lpd)
   00670 One carbon pool by folate
    SPPYR_1907 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sphu04147]
    SPPYR_1907 (lpd)
Enzymes [BR:sphu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SPPYR_1907 (lpd)
Exosome [BR:sphu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SPPYR_1907 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored NAD_binding_8 GIDA HI0933_like FAD_binding_3 AlaDh_PNT_C Lys_Orn_oxgnase 2-Hacid_dh_C Thi4 3HCDH_N UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: SBV33027
UniProt: A0A1Y5PZT4
LinkDB
Position
SPPYR:2038152..2039549
AA seq 465 aa
MADTNYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEI
YHYMQHAGDYGLIAQQISADIDAVVKRSRGVAKQLSQGVAFLMKKHKITVHMGEGKLTAP
GKLEVKGEKGSETLTAKNIIVATGARARDLPFAPADGKRIWTYRHALVPPEMPKKLLVIG
SGAIGIEFASFYSDMGAEVTVVEMLDRLVPVEDADVSAFLEKALKKQGMTIHTGAGVEEL
KATANGVSAKIKGKDGKVESAEFSHAIVAIGIVPNTENIGLETLGVKTTKGHIDTDAMCR
TNVPGIWAIGDVTAPPWLAHKAMHESIIAVEAIAGNHPHAMDPRNIPGCTYCRPQIASVG
LTEAKAKELGYEVKAGTFPFIGNGKAIALGEAEGFTKTVFDAKTGELLGAHMIGAEVTEL
IQGYTIGKTAELVEDDFIGTVFPHPTLSETMHEGVLAAFGRPLHI
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggctgacaccaactacgacctcatcgttctcggttcggggcccggcggctatgtcgcg
gcgatccgcgcggcgcagctcgggctcaagactgcaatcgtcgagcgcgagaatctcggc
ggcatctgcctcaactgggggtgcatcccgacgaaggcgctgctgcgttcggccgaaatc
tatcactacatgcagcacgcgggcgactatggcctgatcgcccagcagatcagcgctgac
atcgacgcggtggtgaagcgcagccgcggcgtcgccaagcaactcagccagggcgtcgcc
ttcctgatgaagaagcacaagatcaccgtccatatgggcgagggcaagctgaccgcgccg
ggcaagctcgaagtgaagggcgagaaaggcagcgaaaccctcaccgcgaagaacatcatc
gtcgcgaccggcgcgcgcgcccgcgatctgccgttcgcgcccgccgacggcaagcgcatc
tggacctatcgccacgcgctcgtcccgcccgaaatgccgaagaagctgctcgtcatcggc
tcgggcgcgatcgggatcgaattcgcgagcttctacagcgacatgggcgccgaagtgacc
gtcgtcgaaatgctcgaccgcctcgtccccgtcgaggatgccgacgtctcggccttcctc
gaaaaggcgctcaagaaacagggcatgacgatccacaccggcgcgggcgtcgaggaactg
aaggccaccgccaacggcgtctcggcgaagatcaagggcaaggacggcaaggtcgaaagc
gccgagttcagccacgcgatcgtggcaatcggcatcgttccgaacaccgaaaatatcggt
ctcgaaacgctcggcgtgaagacgaccaagggccatatcgacaccgacgcgatgtgccgc
accaatgtgcccggcatctgggcgatcggcgacgtcaccgcgccgccgtggctcgcgcac
aaggcgatgcacgaatcgatcatcgcggtcgaggcgatcgcgggcaatcatccgcacgcg
atggacccgcgcaacatcccgggctgcacctattgccgcccgcagatcgccagcgtcggg
ctgaccgaggcgaaggcgaaggagctcggttacgaggtgaaggccggcaccttcccgttc
atcggcaacggcaaggcgatcgcgctgggcgaggccgagggttttaccaagaccgtgttc
gacgccaagaccggcgaactgctcggcgcgcacatgatcggcgccgaggtcaccgagctg
attcagggctatacgatcggcaagaccgccgaactggtcgaggatgatttcatcggcacc
gtcttcccgcatccgaccttgagcgagacgatgcacgaaggcgtgctcgcggcgttcggg
cggccgctgcatatttag

DBGET integrated database retrieval system