Uncultured Sphingopyxis sp. UC10: SPPYR_1975
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Entry
SPPYR_1975 CDS
T05531
Name
(GenBank) Pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphu03009
]
SPPYR_1975
Enzymes [BR:
sphu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SPPYR_1975
Ribosome biogenesis [BR:
sphu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SPPYR_1975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
SBV33095
UniProt:
A0A1Y5PWU7
LinkDB
All DBs
Position
SPPYR:2101645..2102490
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AA seq
281 aa
AA seq
DB search
MTTRRPPRASTRPAAAHDVPKGRRAARGAASALKTRPAEEREDGPQRIAKLLARAGVGSR
RDVERMIEEGRIALNGEVIAQPAPLLASLDGLTVDGNPVAKPVSTRLYRFHKPAGCLTAA
RDPKGRKTIYDLLPKGLPRLMPIGRLDYNTEGLLLLTNDGEFKRQLELPASGVERTYRAR
AFGDISQAQLEELAMGIEIDGVRYGRIDANLERRTGRNQWVEMTLTEGKNREVRRVLEHF
GLQVSRLIRTRYGEFTLAGLDMGAVEVVPRDELFKFRRRLG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgccgtccgccccgcgccagcacccgccccgccgcagcccacgatgtcccg
aaaggccgccgcgccgcgcgcggcgctgcatccgcactcaagaccaggcccgccgaagag
cgcgaggacgggccgcagcgcatcgccaagctgctcgcgcgcgccggcgtcggctcgcgc
cgcgacgtcgaacggatgatcgaggaggggcgcatcgcgctgaatggcgaggtgatcgcg
cagcccgccccgctgctcgcctcgctcgacgggctgacggtcgacggcaacccggtcgcg
aaacccgtttcgacgcgcctctatcgctttcacaagcccgcgggctgccttaccgccgcg
cgcgatcccaagggccgcaagacgatctacgatcttttgcccaaggggctaccgcgcctg
atgcccatcggccgcctcgattataataccgaggggctgctgctgctcaccaacgacggc
gaattcaagcgccagctcgaactgcccgcgagcggggtcgagcgcacctatcgcgcgcgc
gcctttggcgacatcagccaggcgcagctcgaggaactcgcgatggggatcgagatcgac
ggcgtccgctacgggcggatcgacgccaatctggagcgccgcaccggccgcaaccagtgg
gtcgagatgacgctgaccgaaggcaagaaccgcgaagtccgccgcgtgctcgaacatttc
gggctgcaggtcagccgcctgatccgcacgcgctatggcgagttcaccctcgccgggctc
gacatgggcgcggttgaggtcgtgccgcgcgacgaattgttcaaattccggcggcgtctc
ggctga
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