Uncultured Sphingopyxis sp. UC10: SPPYR_1985
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Entry
SPPYR_1985 CDS
T05531
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
sphu
Uncultured Sphingopyxis sp. UC10
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_4
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
SBV33105
UniProt:
A0A1Y5PWV5
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Position
SPPYR:complement(2113297..2114652)
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AA seq
451 aa
AA seq
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MNFADLGLSDELLRAIDESGYTEPTAIQAGAIPSVLMMRDMIGIAQTGTGKTASFVLPMI
DILAHGRARALMPRSLILEPTRELAAQVAENFEKYGKYHKLSMALLIGGVQMGDQVKALE
KGVDVLIATPGRLMDLFERGKILLTGCNLLVIDEADRMLDMGFIPDIENICTKLPANRQT
LLFSATMPPPIKKLADKFLSNPKTVEVARPASRNENIEQFLVKTSERGKRDTLRDLLEAE
DVGTAIIFCNRKTTVRDLAKSLQRYRYKAGEIHGDMDQSSRIAELDRFKAGTINILVASD
VAARGLDVKGVSHVFNFDAPWHPDDYVHRIGRTGRAGAKGRAFTLVTPSDDEAVDNIQKL
TGYQIPVHGGEGGAPQRATDGDADEREPRRGRRAGAKAAKEPKRAVEKPAKAPKKDAGRK
PAPRSRHDDDDGPDDGWNGPMPGFLSVGFGS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgccgacctcggcctttccgatgaacttttgcgcgcgatcgacgagtcgggc
tataccgagccgaccgccattcaggcgggcgcgatcccctcggtgctgatgatgcgcgac
atgatcggcatcgcccagacgggtacgggcaagacggcgtccttcgtgctgccgatgatc
gacatcctcgcgcacggccgcgcccgcgcgctgatgccgcgttcgctgatcctcgagcct
acgcgtgaactcgctgcacaagtcgcggaaaattttgaaaaatacggcaagtatcacaag
ctttcgatggcgctgctcatcggcggcgtgcagatgggcgaccaggtgaaggcgctcgaa
aagggcgtcgacgtgctgatcgcgacgcccggccgcctgatggacctgttcgagcgcggc
aagatattgctcaccggctgcaacctgctggtgatcgacgaagccgaccggatgctcgac
atgggcttcattcccgacatcgagaatatctgcaccaagctgcccgcgaatcggcagacg
ctgctgttctcggcgacgatgccgccgccgatcaagaagctcgccgacaaattcctctcg
aacccgaagacggtcgaggtcgcgcgccccgcgagccgcaacgagaatatcgagcagttc
ctcgtcaagacgtccgaacgcggcaagcgcgatacattgcgcgacctgctcgaggccgaa
gacgtcggcaccgctatcatcttctgcaaccgcaagacgacggtgcgcgacctcgcgaaa
tcgcttcagcgctatcggtacaaggccggcgagatccatggcgacatggaccagtcgagc
cgcatcgccgaactcgaccgcttcaaggcggggacgatcaacatcctcgtggcgtcggac
gtcgcggcgcgcgggctcgacgtcaagggcgtcagccatgtcttcaatttcgatgcgccg
tggcaccccgacgattatgttcaccggatcggccgcaccggccgcgcgggcgccaaggga
cgcgccttcacgctggtgacgccctcggatgacgaggcggtcgacaatatccagaagctg
acgggctatcagattccggtccatggcggggagggtggtgcgccgcagcgggccaccgac
ggcgacgccgacgagcgcgaaccgcgacgcgggcgacgggcgggtgccaaagccgcgaag
gaaccgaagcgcgcggttgaaaagccggccaaggccccgaagaaggacgccggccggaaa
ccggctccgcggtcgcggcacgacgatgacgacggtcccgacgacgggtggaacgggccg
atgcccggtttcctgtcggtgggattcggtagctga
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