Uncultured Sphingopyxis sp. UC10: SPPYR_2234
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Entry
SPPYR_2234 CDS
T05531
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03030
DNA replication
sphu03430
Mismatch repair
sphu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPPYR_2234
03430 Mismatch repair
SPPYR_2234
03440 Homologous recombination
SPPYR_2234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphu03032
]
SPPYR_2234
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_2234
Enzymes [BR:
sphu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPPYR_2234
DNA replication proteins [BR:
sphu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPPYR_2234
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPPYR_2234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_5
RuvB_N
AAA_22
AAA_16
AAA_30
AAA_14
AAA_assoc_2
AAA_24
AAA_19
PIF1
Glyco_tranf_2_5
Cdc6_lid
AAA_2
AAA_18
DUF815
Motif
Other DBs
NCBI-ProteinID:
SBV33354
UniProt:
A0A1Y5Q1K5
LinkDB
All DBs
Position
SPPYR:complement(2365411..2367114)
Genome browser
AA seq
567 aa
AA seq
DB search
MSDSADDETPMLGMDLPETAPQPSSGPYRVLARKYRPQTFAELIGQDAMVRTLGNAIARD
RLAHAFLMTGVRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGVCEPCRAITEGRHIDV
IEMDAASNTGVDDVREIIEAVRYAAVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPPHV
KFLFATTEVNKVPVTVLSRCQRFDLRRITPDMLFAHFSAILQKEGVEAEAPAIWLIANAA
EGSVRDGLSILDQAIAHADLDGGGKIGADQVRIMLGLSDRTSIAQLMAAILDGDAGGAID
LARGQYALGIEPVAMVRGLMDLTHAITLAKVSRHDDPALAASDRERIGDWAQKLGFAPLN
RLWQLLLKGHEEVLRANNPLEHLEMLLLRVIYAASLPDPGELAKLLEKGGVPATPMVAPA
APAGQGDTVAAAPIDAPAAEAPASALTIAQIHQLLEGTGNHQLALQVYDHLEILELEPGL
IVHAPAPALDGDFARKLGEALLKETGSRWQVRVGEGDARPSLGQMKAAKLADNDARIREL
PVVKAALAAFPDARLVEGDDNRHRSHP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccgccgacgacgaaactccgatgctgggaatggacctgcccgagacggcg
ccgcagccgtcgtcgggcccctaccgcgtccttgcccgcaaatatcgcccgcagaccttt
gccgaactgatcgggcaggacgcgatggtgcgcacgctcggcaacgcgatcgcgcgcgac
cggctggcgcatgcctttctgatgaccggggtgcgcggggtcggcaagacgtcgaccgcg
cgcctgatcgcgaaggccttgaactgcatcggccccgacgggcagggtgggccgaccatc
gacccgtgtggcgtgtgcgagccgtgccgcgcgatcaccgaagggcgccatatcgacgtg
atcgagatggacgccgcgtcgaacaccggcgtcgacgatgtgcgcgagatcatcgaggca
gtgcgctacgccgcggtctcggcgcgctacaagatctatatcatcgacgaagtgcatatg
ttgtcgcgcaacgcgttcaacgcgctgctgaaaacactcgaagaaccgccgccgcacgtc
aaattcctgttcgcgacgaccgaggtcaacaaggtgccggtgacggtgctgtcgcgctgt
cagcggttcgacctccgccgcatcacgcccgacatgctgttcgcgcatttcagcgcgatt
ttgcagaaggagggcgtcgaggccgaggcgccggcgatctggctgatcgccaatgccgcc
gagggttcggtgcgcgatggcctgtcgatcctcgatcaggcgatcgcgcacgccgacctc
gacggtggcggcaagatcggcgccgatcaggtgcgcatcatgctcggcctgtcggaccgc
acctcgatcgcgcagttgatggcggcgatcctcgacggcgatgcgggcggggcaatcgac
ctcgcgcgcgggcaatatgcgctcgggatcgagcctgtcgcgatggtgcgcgggctgatg
gacctgacgcacgcgatcacgctcgccaaagtgtcgcgccacgacgatcccgcgcttgct
gcatcggaccgcgaacgcatcggcgattgggcgcaaaagcttggtttcgcgccgctcaac
cgcctctggcagttgctactcaaggggcatgaagaggtgctccgcgcgaataatccgctc
gagcatctcgaaatgctgctgctgcgcgtgatctacgccgcgtcgctgcccgatccgggc
gagcttgcgaagctgctcgaaaagggtggcgtcccggcgacgccgatggtcgcgccggcc
gcacccgcggggcaaggcgataccgtcgcggcggcgcccatcgatgcgcccgcagccgaa
gccccggcttcggcgctgaccatcgcgcagatccaccagcttctcgaaggcacgggaaat
catcagcttgccttgcaagtctacgatcatctcgagattctcgaacttgaaccgggcttg
atcgtccatgcgcctgcgcccgcgctcgacggtgatttcgcgcgtaagctcggcgaggcg
ctgctcaaggagacgggaagccgctggcaggttcgcgtcggtgaaggcgatgcgcgcccg
agtctcgggcagatgaaggcggcgaagctcgccgacaatgacgcgcggattcgcgaactg
cccgttgtgaaggccgctctggccgctttccccgatgcgaggcttgtcgaaggcgacgac
aatcgccataggtcgcacccatga
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