Uncultured Sphingopyxis sp. UC10: SPPYR_2240
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Entry
SPPYR_2240 CDS
T05531
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00260
Glycine, serine and threonine metabolism
sphu00460
Cyanoamino acid metabolism
sphu00630
Glyoxylate and dicarboxylate metabolism
sphu00670
One carbon pool by folate
sphu00680
Methane metabolism
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01120
Microbial metabolism in diverse environments
sphu01200
Carbon metabolism
sphu01230
Biosynthesis of amino acids
sphu01240
Biosynthesis of cofactors
sphu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPPYR_2240 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SPPYR_2240 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPPYR_2240 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SPPYR_2240 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SPPYR_2240 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SPPYR_2240 (glyA)
Enzymes [BR:
sphu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SPPYR_2240 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
SBV33360
UniProt:
A0A1Y5PTQ2
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All DBs
Position
SPPYR:2370841..2372148
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AA seq
435 aa
AA seq
DB search
MTTDTLDKPIKSAGYFTDGVGTVDPAVAAAMKHELEREQYQIELIASENIVSKAVLEAQG
SVFTNKYAEGYPGRRYYQGCAPSDEVETLAIDRAKQLFDAGFVNVQPHSGAQANGAVMLA
LTKPGATIMGMSLDAGGHLTHGAPPAMSGKWYNAVQYGVRPDDHLVDFDQVEALAKEHRP
SLIIAGGSAYPRTLDFARFRAIADDVGALLMVDMAHFAGLVAGGAHPSPMEHAHVVTTTT
HKTLRGPRGGMILTNDEAIAKRINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKTYAK
ATIANAQALANRLKARGADVVAGGTDTHLALIDLRPLGITGRDADEALERSAITCNKNGI
PFDPLPPVKTSGIRVGSPAGTTRGFGIAEFEEIGDMVADVLEALRDKGEHGDADVEAEVR
GRVRALCERFPIYQG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagacacgctcgacaagcccatcaaatcggccggctatttcaccgacggcgtc
ggcaccgtcgaccccgcggttgctgcggcaatgaaacatgaactcgaacgcgagcaatat
cagatcgaactgatcgcgtcggagaatatcgtttcgaaagcggtgctcgaagcgcagggg
tcggtcttcaccaacaaatatgccgaaggctatccgggccgtcgctattatcagggctgc
gcgccgtcggacgaggtcgaaaccctcgcgatcgaccgtgcgaagcagctgttcgacgcc
ggcttcgtcaacgtccagccgcattcgggcgcgcaggcgaacggcgcggtgatgctcgcg
ctgaccaagcccggcgcgacgatcatgggcatgagcctcgacgccggcggccacctgacc
catggcgcgccgcccgccatgtcaggcaaatggtataatgccgtgcaatatggcgtgcgc
cccgacgaccatctcgtcgatttcgaccaggtcgaggcgctggcgaaggaacatcgcccc
tcgctgatcatcgcgggcggctcggcctatccgcgcacgctcgacttcgcgcgcttccgc
gccatcgccgacgatgtcggcgcgctgttgatggtcgacatggcgcatttcgccggtctc
gttgcgggcggcgcgcacccctcgccgatggaacatgcgcatgtcgtcacgacgacgacg
cacaagacgctgcgcggcccgcgcggcggcatgatcctcaccaatgacgaagcgatcgcc
aagcgcatcaactcggcggtcttccccgggctgcagggtggcccgctgatgcacgtcatc
gccgccaaagcggtcgcgttcggcgaggcgctgcgccccgaattcaaaacctatgcgaag
gcgacgatcgccaatgcgcaggcgctcgcgaaccggctgaaggcgcgcggcgccgacgtc
gtcgcgggcggcaccgacacgcacctcgcgctgatcgacctgcgcccgctcggcatcacc
ggccgcgacgccgacgaggcgctcgagcgcagcgcgatcacctgcaacaagaacggcatt
cccttcgacccgctgccgccggtcaagaccagcggcatccgcgtcggatcgcctgcgggc
acgacgcgcggcttcggcatcgccgagttcgaagaaatcggcgacatggtcgccgacgtg
ctcgaggcgctgcgcgacaagggcgagcatggcgacgccgatgtcgaggcggaggtccgc
ggccgcgtccgcgcgctgtgcgaacgcttccccatctatcagggataa
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