Uncultured Sphingopyxis sp. UC10: SPPYR_2246
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Entry
SPPYR_2246 CDS
T05531
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SPPYR_2246 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sphu03011
]
SPPYR_2246 (rpsD)
Ribosome [BR:
sphu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SPPYR_2246 (rpsD)
Bacteria
SPPYR_2246 (rpsD)
Archaea
SPPYR_2246 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
SBV33366
UniProt:
A0A1Y5PXF8
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All DBs
Position
SPPYR:2374844..2375455
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AA seq
203 aa
AA seq
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MSKRQSAKYKLDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGIQLRAKQKLKG
YYGDITEKQFKKNYFEASRMKGDTGQNLIGLLERRLDAVVYRSKFTPTIFSARQLVSHGH
VYVNGVKCNIASRLVKPGDEVTLGKKAQEMALVAEAQSLPERDLPEYLAIDGTKATFVRV
PTLDEVPYPVKMEPNLVVEFYSR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgccagagcgccaagtataaactcgaccgccggatgggtgaaaacatctgg
ggtcgcccgaagagcccggtcaaccgccgcgaatatggccccggccagcacggccagcgc
cgcaagggcaagatgtcggacttcggcatccagctccgcgcgaagcagaagctgaagggc
tattacggcgacatcaccgaaaagcagttcaagaagaattatttcgaagcctcgcgcatg
aagggcgacaccggccagaacctgatcggcctgctcgaacgccgcctcgacgccgtcgtc
tatcgttcgaagttcacgccgaccatcttctcggcgcgccagctcgtcagccacggccac
gtctatgtaaatggcgtgaagtgcaacatcgcgagccgcctcgtgaagccgggcgacgaa
gtcaccctcggcaagaaggcgcaggaaatggcgctggtcgccgaagcgcagagcctgccc
gagcgcgacctgcccgaatatctcgccatcgacggcaccaaggcgaccttcgtccgcgtc
ccgacgctcgacgaagtgccctatccggtgaagatggaaccgaacctggtcgtcgaattc
tattcgcgctga
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