Uncultured Sphingopyxis sp. UC10: SPPYR_2507
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Entry
SPPYR_2507 CDS
T05531
Symbol
yliG
Name
(GenBank) putative AdoMet-dependent methyltransferase, UPF0004 family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphu03009
]
SPPYR_2507 (yliG)
Enzymes [BR:
sphu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SPPYR_2507 (yliG)
Ribosome biogenesis [BR:
sphu03009
]
Prokaryotic type
ribosomal protein modification factors
SPPYR_2507 (yliG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
SBV33627
UniProt:
A0A1Y5Q1I0
LinkDB
All DBs
Position
SPPYR:2642874..2644244
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AA seq
456 aa
AA seq
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MTVKTLPTQPKVGMVSLGCPKALVDSERILTKLRADGYGLSPDYAGADVVLVNTCGFLDS
AKEESLEAIGEAMAENGRVIVTGCMGNEAEVIRARFPKVLAVTGAHQYEQVVDAVHDAAP
PTQGPFIDLVPEGGLKLTPRHYSYLKISEGCNHSCSFCIIPDLRGKLVSRRVDAVLREAE
KLVAAGTKELLVISQDTSAYGVDIRHDPRQWHGREVRAHMTDLARELGQLRTSEGRAPWV
RLHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHASPSVLKRMKRPANEAKVLERLKAWRA
IAPDIAIRSSFVVGFPGETEEDFQYLLDWLDEAQLDRVGAFRFEPVAGAQANALDDPVPE
EVKEERYQRIMAKTAAISAAKLAAKIGRTLPVIIDEVGEADEEGSIGATGRSQADAPEID
GHVYLRDVAGTLQAGDIVDVEIEDADEHDLFGVVAS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcaaaacgctccccacccagccgaaggtcggcatggtttcgctcggctgcccc
aaggcgctcgtcgacagcgaacggattctcacgaagctgcgcgccgacggttacggcctg
tcgcccgattatgcgggcgccgacgtcgtgctcgtcaacacctgcggcttcctcgattcg
gcgaaggaagaaagcctcgaggcgatcggcgaagcgatggccgagaacggccgcgtcatc
gtcaccggttgcatgggcaatgaggccgaggtcatccgcgcgcgctttcccaaggtgctc
gcggtcaccggcgcgcatcaatatgagcaggtcgtcgatgccgtccacgacgccgcgccg
cccacccaaggccccttcatcgacctcgtccccgagggcgggctgaagctcaccccgcgc
cactacagctatctgaagatcagcgaaggctgcaaccacagctgctccttctgcatcatc
cccgacctgcgcggcaagctggtgtcgcgccgcgtcgatgcggtgctgcgcgaggccgag
aaactcgtcgccgcggggacgaaggaactgctggtgatcagccaggacacctcggcctat
ggcgtcgacatccgccacgacccgcgccaatggcacggccgcgaagtgcgcgcgcatatg
accgatctcgcgcgcgaactcggccagcttcggacgagcgaaggccgcgcgccgtgggtg
cgcctccactatgtctatccctatccgcacgtcgacgcggtgatcccgctgatggccgaa
gggctgctgacgccttacctcgacatcccgttccagcacgcgagcccgagcgtcctcaag
cgcatgaagcgcccggcgaacgaagcgaaggtgctcgaacggctgaaggcgtggcgcgcc
atcgctcccgacatcgcgatccgctcgagcttcgtcgtcggcttccccggcgagaccgaa
gaggatttccagtatcttctcgactggctcgacgaagcgcagctcgaccgcgtcggcgcc
ttccgcttcgaacccgtcgcgggggcgcaggcgaatgcgctcgacgatccggtgcccgaa
gaggtcaaggaagaacgctatcagcgcatcatggcgaagaccgccgcgatcagcgccgcg
aagctcgccgccaagatcggccgcaccctccccgtcatcatcgacgaagtcggcgaggcc
gatgaggaaggcagcatcggcgccacgggccgcagccaggccgacgcgcccgagatcgac
ggccatgtctatctgcgcgacgtcgcggggacgctgcaggcgggcgacatcgtcgatgtc
gaaatcgaggacgccgacgagcacgacctgttcggggtcgtcgcgagttga
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