KEGG   Uncultured Sphingopyxis sp. UC10: SPPYR_2621
Entry
SPPYR_2621        CDS       T05531                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
sphu  Uncultured Sphingopyxis sp. UC10
Pathway
sphu03030  DNA replication
sphu03410  Base excision repair
sphu03420  Nucleotide excision repair
sphu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sphu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPPYR_2621 (polA)
   03410 Base excision repair
    SPPYR_2621 (polA)
   03420 Nucleotide excision repair
    SPPYR_2621 (polA)
   03440 Homologous recombination
    SPPYR_2621 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphu03032]
    SPPYR_2621 (polA)
   03400 DNA repair and recombination proteins [BR:sphu03400]
    SPPYR_2621 (polA)
Enzymes [BR:sphu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SPPYR_2621 (polA)
DNA replication proteins [BR:sphu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SPPYR_2621 (polA)
DNA repair and recombination proteins [BR:sphu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     SPPYR_2621 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SPPYR_2621 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 DNA_polI_exo1 DprA_N NYN_YacP
Other DBs
NCBI-ProteinID: SBV33741
UniProt: A0A1Y5PUS8
LinkDB
Position
SPPYR:2768073..2770883
AA seq 936 aa
MSEKNHLYLVDGSSYIFRAYHRLPPLTNPKGVPVGAVYGYTTMLWKLAKDLHDADGPTHL
AVILDHSSQSFRNEIYDQYKANRPEPPEDLVPQFPLIRDATRAFSLPCIEMEGFEADDLI
ASYAEAAVREGWDVTIVSSDKDLMQLIREPEGGPQVDMLDTMKNVRMGLEAVNEKFGVTP
DLVGDVLALMGDSVDNVPGVRGVGPKTATKLIQEYGNLTAALDGAATMKASKLRDNLIEH
RGLAELSRILVDLKRDCPLPDPLDAFKLGAIPPLPLKSFLDEHGFRSLSAKLDLGGTPGG
PPTLPRASAAPATPAAGPSTPALPSMPAIDRALYETVTTIEALDRWIDEARAAHVVAIDT
ETASLDSVTGTLVGVSMATAPGRACYIPLGHGGTDMFAEKPDQVPLADAIGRLHALFADE
AVLKVGHNLKYDIGVLAQHGLTIAPYDDTLVMSFALDAGKHQHGLDELAKLHLDHVCLSF
KEVCGTGKSQISFAEVPLDRATQYAAEDAEVAWRLWKLLKLRLPIEGGTRIYEMVDRPLA
AVVEGMERAGIMVNRDYLARLSGEFANEMLRIEAEIHELAGQPFAIGSPKQLGEILFDKL
GLKGGRKGKSGDWSTDQNELERLERDGVPIARKILEWRQLAKLKSTYTDALQQQINAVTG
RVHTSYSLVGAQTGRLSSTDPNLQNIPIRTEVGRQIRDAFIAAPGHVLMAADYSQIELRL
AAHMADVPELKEAFAKGQDIHAATAIELFGEVNRDTRAKAKTINFAILYGISRWGLAGRL
EITPDEAQALIARYFERFPGISDYITDTLERARERGYTETLYGRKTWFPRIKAANQNERA
GSERAAINAPIQGTSADLIKRAMARMPKALADAGLSDVRMLLQVHDELVFEAPEDKAAAA
SDVIRAVMSGAAGPVLELLVPLEVEIGTGKSWGEAH
NT seq 2811 nt   +upstreamnt  +downstreamnt
atgtccgagaagaatcatctctatctggtcgatggctccagctacatcttccgcgcctat
caccgcctgccgccgctgacgaaccccaagggtgtgcccgtcggcgcggtctatggctat
acgacgatgctctggaagctcgcgaaggatctgcacgacgccgacgggccgacgcacctt
gccgtcatcctcgatcattcgagccagtcgttccgcaacgagatttacgaccagtataag
gcgaaccggcccgagccgcccgaagacctcgtcccgcaattcccgctgatccgcgacgcg
acgcgcgccttttcgctgccgtgcatcgagatggagggtttcgaggccgacgatctgatc
gcctcctatgccgaagcggcggtgcgtgagggctgggacgtcacgatcgtgtcgtccgac
aaggacctgatgcagctgatccgcgagcccgagggcggcccgcaggtcgatatgctcgac
acgatgaagaatgtccgcatgggtttggaagcggtgaacgagaagttcggcgtcacgccc
gatctggtcggcgacgtgctcgcgctgatgggcgacagcgtcgacaatgttcccggcgtg
cgcggcgtggggcccaagaccgcgaccaagctgatccaggaatatggcaatctcaccgcc
gcgctcgacggcgcggcaacgatgaaggcgtcgaagctgcgcgacaatctgatcgagcat
cgcggactcgccgaactgtcgcgcatcctggtcgacctgaagcgcgactgcccgctcccc
gacccgctcgatgcgttcaagctcggcgcgatcccgccgctgccgctcaagagcttcctc
gacgagcatggtttccgctcgctgtcggcgaagctcgatctcggcggcacgcccggcggg
cccccgaccctgccgcgcgcgagcgccgcaccggcgacgcccgcggccgggccatcgacc
cctgctctcccatcgatgccggcgatcgaccgcgcgctgtacgagacggtgacgacgatc
gaggcgctcgaccgctggatcgacgaagcgcgcgccgcgcatgtcgtcgcgatcgacacc
gaaaccgcgagcctcgacagcgtcaccggcaccctcgtcggcgtcagcatggcgaccgcg
ccggggcgcgcttgctacatcccgctcggccacggcggcaccgacatgttcgccgaaaag
cccgatcaggtgccgctcgccgacgcgatcggccgtcttcatgcgctcttcgccgacgag
gccgtgctcaaggtcgggcacaacctcaaatatgacatcggcgtgctcgcgcagcatggg
ctgaccatcgcgccctatgacgatactttggtgatgagcttcgcgctcgacgcgggcaag
catcagcacgggctcgacgaactggcgaaactgcacctcgaccatgtctgcctgtcgttc
aaggaagtctgcggtacgggcaagtcgcagatcagcttcgccgaggtgccgctcgaccgc
gcgacccaatatgcggccgaggatgccgaggtcgcgtggcggctgtggaagctgctcaag
ctgcgcctccccatcgagggcggcacgcgcatctacgagatggtcgaccgcccgctcgcc
gccgtcgtcgaggggatggagcgcgccggcatcatggtgaaccgcgactatctcgcgcgc
ctgtcgggcgagttcgcgaacgagatgctccgcatcgaggccgagattcacgagctggcg
ggccagcccttcgcgatcggcagccccaagcagcttggcgagattcttttcgacaagctg
gggctgaaaggcgggcgcaagggcaagtcgggcgactggtcgaccgaccagaacgagctc
gaacggctcgagcgcgacggcgtgccgatcgcgcgcaagatattggaatggcgccagctc
gcgaaattgaagtcgacctataccgacgcgctgcaacaacagatcaacgcggtgaccggc
cgcgtccacacgagctacagtctcgtcggcgcgcagaccggccggttgtcgtcgaccgac
ccgaatttgcagaatatcccgatccgcaccgaggtcggccgccagatccgcgacgccttc
atcgccgcgccgggccatgtgctgatggccgccgactatagccagatcgagctcaggctt
gcggcgcacatggccgacgtgcccgaactcaaggaagcgttcgcgaagggacaggatatt
cacgccgcgacggcgatcgaattgttcggcgaggtcaaccgcgacacccgcgccaaggcg
aagacgatcaacttcgcgatcctctacggcatttcgcgttggggcctcgccggccggctc
gaaatcacccccgacgaggcacaggcgctgatcgcgcgctatttcgaacgcttccccggc
atctcggactatattaccgacacgctcgagcgcgcgcgcgagcgcggctataccgaaacg
ctgtacggccggaagacctggttcccgcgcatcaaggcggcgaaccagaacgaacgcgcg
ggcagcgagcgcgccgcgatcaacgcgccgatccagggcaccagcgccgacctgatcaag
cgggcgatggcgcgcatgccgaaagccttggccgatgcggggctttccgacgtcaggatg
ctgctccaagtccacgacgaactggtgttcgaagcgcccgaggacaaggcggcggccgcg
agcgacgtcatccgcgcggtgatgtcgggcgccgccgggccggtgctcgaactcttggtc
cctctcgaggtcgagatcggcacgggcaagagctggggcgaagcgcattga

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