Uncultured Sphingopyxis sp. UC10: SPPYR_2621
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Entry
SPPYR_2621 CDS
T05531
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu03030
DNA replication
sphu03410
Base excision repair
sphu03420
Nucleotide excision repair
sphu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPPYR_2621 (polA)
03410 Base excision repair
SPPYR_2621 (polA)
03420 Nucleotide excision repair
SPPYR_2621 (polA)
03440 Homologous recombination
SPPYR_2621 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphu03032
]
SPPYR_2621 (polA)
03400 DNA repair and recombination proteins [BR:
sphu03400
]
SPPYR_2621 (polA)
Enzymes [BR:
sphu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPPYR_2621 (polA)
DNA replication proteins [BR:
sphu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPPYR_2621 (polA)
DNA repair and recombination proteins [BR:
sphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SPPYR_2621 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPPYR_2621 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
DNA_polI_exo1
DprA_N
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
SBV33741
UniProt:
A0A1Y5PUS8
LinkDB
All DBs
Position
SPPYR:2768073..2770883
Genome browser
AA seq
936 aa
AA seq
DB search
MSEKNHLYLVDGSSYIFRAYHRLPPLTNPKGVPVGAVYGYTTMLWKLAKDLHDADGPTHL
AVILDHSSQSFRNEIYDQYKANRPEPPEDLVPQFPLIRDATRAFSLPCIEMEGFEADDLI
ASYAEAAVREGWDVTIVSSDKDLMQLIREPEGGPQVDMLDTMKNVRMGLEAVNEKFGVTP
DLVGDVLALMGDSVDNVPGVRGVGPKTATKLIQEYGNLTAALDGAATMKASKLRDNLIEH
RGLAELSRILVDLKRDCPLPDPLDAFKLGAIPPLPLKSFLDEHGFRSLSAKLDLGGTPGG
PPTLPRASAAPATPAAGPSTPALPSMPAIDRALYETVTTIEALDRWIDEARAAHVVAIDT
ETASLDSVTGTLVGVSMATAPGRACYIPLGHGGTDMFAEKPDQVPLADAIGRLHALFADE
AVLKVGHNLKYDIGVLAQHGLTIAPYDDTLVMSFALDAGKHQHGLDELAKLHLDHVCLSF
KEVCGTGKSQISFAEVPLDRATQYAAEDAEVAWRLWKLLKLRLPIEGGTRIYEMVDRPLA
AVVEGMERAGIMVNRDYLARLSGEFANEMLRIEAEIHELAGQPFAIGSPKQLGEILFDKL
GLKGGRKGKSGDWSTDQNELERLERDGVPIARKILEWRQLAKLKSTYTDALQQQINAVTG
RVHTSYSLVGAQTGRLSSTDPNLQNIPIRTEVGRQIRDAFIAAPGHVLMAADYSQIELRL
AAHMADVPELKEAFAKGQDIHAATAIELFGEVNRDTRAKAKTINFAILYGISRWGLAGRL
EITPDEAQALIARYFERFPGISDYITDTLERARERGYTETLYGRKTWFPRIKAANQNERA
GSERAAINAPIQGTSADLIKRAMARMPKALADAGLSDVRMLLQVHDELVFEAPEDKAAAA
SDVIRAVMSGAAGPVLELLVPLEVEIGTGKSWGEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaagaatcatctctatctggtcgatggctccagctacatcttccgcgcctat
caccgcctgccgccgctgacgaaccccaagggtgtgcccgtcggcgcggtctatggctat
acgacgatgctctggaagctcgcgaaggatctgcacgacgccgacgggccgacgcacctt
gccgtcatcctcgatcattcgagccagtcgttccgcaacgagatttacgaccagtataag
gcgaaccggcccgagccgcccgaagacctcgtcccgcaattcccgctgatccgcgacgcg
acgcgcgccttttcgctgccgtgcatcgagatggagggtttcgaggccgacgatctgatc
gcctcctatgccgaagcggcggtgcgtgagggctgggacgtcacgatcgtgtcgtccgac
aaggacctgatgcagctgatccgcgagcccgagggcggcccgcaggtcgatatgctcgac
acgatgaagaatgtccgcatgggtttggaagcggtgaacgagaagttcggcgtcacgccc
gatctggtcggcgacgtgctcgcgctgatgggcgacagcgtcgacaatgttcccggcgtg
cgcggcgtggggcccaagaccgcgaccaagctgatccaggaatatggcaatctcaccgcc
gcgctcgacggcgcggcaacgatgaaggcgtcgaagctgcgcgacaatctgatcgagcat
cgcggactcgccgaactgtcgcgcatcctggtcgacctgaagcgcgactgcccgctcccc
gacccgctcgatgcgttcaagctcggcgcgatcccgccgctgccgctcaagagcttcctc
gacgagcatggtttccgctcgctgtcggcgaagctcgatctcggcggcacgcccggcggg
cccccgaccctgccgcgcgcgagcgccgcaccggcgacgcccgcggccgggccatcgacc
cctgctctcccatcgatgccggcgatcgaccgcgcgctgtacgagacggtgacgacgatc
gaggcgctcgaccgctggatcgacgaagcgcgcgccgcgcatgtcgtcgcgatcgacacc
gaaaccgcgagcctcgacagcgtcaccggcaccctcgtcggcgtcagcatggcgaccgcg
ccggggcgcgcttgctacatcccgctcggccacggcggcaccgacatgttcgccgaaaag
cccgatcaggtgccgctcgccgacgcgatcggccgtcttcatgcgctcttcgccgacgag
gccgtgctcaaggtcgggcacaacctcaaatatgacatcggcgtgctcgcgcagcatggg
ctgaccatcgcgccctatgacgatactttggtgatgagcttcgcgctcgacgcgggcaag
catcagcacgggctcgacgaactggcgaaactgcacctcgaccatgtctgcctgtcgttc
aaggaagtctgcggtacgggcaagtcgcagatcagcttcgccgaggtgccgctcgaccgc
gcgacccaatatgcggccgaggatgccgaggtcgcgtggcggctgtggaagctgctcaag
ctgcgcctccccatcgagggcggcacgcgcatctacgagatggtcgaccgcccgctcgcc
gccgtcgtcgaggggatggagcgcgccggcatcatggtgaaccgcgactatctcgcgcgc
ctgtcgggcgagttcgcgaacgagatgctccgcatcgaggccgagattcacgagctggcg
ggccagcccttcgcgatcggcagccccaagcagcttggcgagattcttttcgacaagctg
gggctgaaaggcgggcgcaagggcaagtcgggcgactggtcgaccgaccagaacgagctc
gaacggctcgagcgcgacggcgtgccgatcgcgcgcaagatattggaatggcgccagctc
gcgaaattgaagtcgacctataccgacgcgctgcaacaacagatcaacgcggtgaccggc
cgcgtccacacgagctacagtctcgtcggcgcgcagaccggccggttgtcgtcgaccgac
ccgaatttgcagaatatcccgatccgcaccgaggtcggccgccagatccgcgacgccttc
atcgccgcgccgggccatgtgctgatggccgccgactatagccagatcgagctcaggctt
gcggcgcacatggccgacgtgcccgaactcaaggaagcgttcgcgaagggacaggatatt
cacgccgcgacggcgatcgaattgttcggcgaggtcaaccgcgacacccgcgccaaggcg
aagacgatcaacttcgcgatcctctacggcatttcgcgttggggcctcgccggccggctc
gaaatcacccccgacgaggcacaggcgctgatcgcgcgctatttcgaacgcttccccggc
atctcggactatattaccgacacgctcgagcgcgcgcgcgagcgcggctataccgaaacg
ctgtacggccggaagacctggttcccgcgcatcaaggcggcgaaccagaacgaacgcgcg
ggcagcgagcgcgccgcgatcaacgcgccgatccagggcaccagcgccgacctgatcaag
cgggcgatggcgcgcatgccgaaagccttggccgatgcggggctttccgacgtcaggatg
ctgctccaagtccacgacgaactggtgttcgaagcgcccgaggacaaggcggcggccgcg
agcgacgtcatccgcgcggtgatgtcgggcgccgccgggccggtgctcgaactcttggtc
cctctcgaggtcgagatcggcacgggcaagagctggggcgaagcgcattga
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