Uncultured Sphingopyxis sp. UC10: SPPYR_2701
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Entry
SPPYR_2701 CDS
T05531
Symbol
cysS
Name
(GenBank) Cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPPYR_2701 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphu01007
]
SPPYR_2701 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphu03016
]
SPPYR_2701 (cysS)
Enzymes [BR:
sphu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
SPPYR_2701 (cysS)
Amino acid related enzymes [BR:
sphu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SPPYR_2701 (cysS)
Transfer RNA biogenesis [BR:
sphu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SPPYR_2701 (cysS)
Prokaryotic type
SPPYR_2701 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
CysS_C
tRNA-synt_1g
DALR_2
Motif
Other DBs
NCBI-ProteinID:
SBV33821
UniProt:
A0A1Y5PV01
LinkDB
All DBs
Position
SPPYR:2855964..2857445
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AA seq
493 aa
AA seq
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MGAVMTDAPASPLKLFNSLTRSLETFEPVHPGVPGDPAQPPEARVYSCGPTVYNYPHIGN
MRAYVFADTLGRTLTYKGYKLTHVINITDVGHLTDDADAGEDKLEKAAAERAQSIWDIAR
HYTEAYWADIEALNIRQPAHWSIATDYVPQMIEFAKAIADKHCYELDGGLYFDTTTVADY
GRLARHGTDEGESRIDPVDGKRHPADFAIWRRTPPGEKRQMEWDSPWGRGAPGWHLECSV
MSEALLGFPFDIHTGGIDHREIHHPNEIAQNQAHSCSDASGARLWMHNNFLVDRSGKMSK
SSGEFLRVQLLIDKGYHPLAYRLMCLQAHYRSELEFSWEGLGAALTRLKRLVMAAAPVRD
AEPAEPADRRLAELLARFDTAMSDDLNTPVALTLLEEAAAMKKIDGGQKRATLAAMDAVL
GLDLLTIDRADLRVRPKAATIAEDEIEAILARRKEARAAKDFAASDALRDELGAAGVEVM
DGDPLGWEWRLDN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggtcatgaccgacgcccctgcctccccgctaaagttgttcaacagcctgacg
cgcagcctcgagaccttcgagcccgtccaccccggcgtccctggcgatccggctcagccg
ccggaggcgcgcgtctatagctgcggcccgacggtctataattatccgcatatcggcaat
atgcgcgcctatgtcttcgccgacacgctcggccgcacgctgacgtacaaaggctacaag
ctcacccacgtcatcaacatcaccgacgtcggccatctaaccgacgacgccgatgcgggc
gaggacaagctggaaaaggccgcggccgagcgcgcgcaatcgatctgggacatcgcgcgc
cattataccgaggcctattgggccgacatcgaggcgctgaacatccgccagcccgcgcac
tggtcgatcgcaaccgactatgtcccgcagatgatcgaattcgcaaaggcgatcgccgac
aagcattgctacgaactcgacggcggcctctatttcgacacgacgacggtcgccgattac
ggtcgcctcgcgcgccacggcaccgacgaaggcgaaagccgtatcgaccccgtcgacggc
aagcgccaccccgccgatttcgcgatctggcgcaggaccccgccgggcgagaaacgccag
atggagtgggattcgccctggggccgcggcgcgcccggctggcatctcgaatgctcggtg
atgtccgaagccctgctcggctttccgttcgacatccacaccggcggcatcgaccaccgc
gagatccatcatccgaacgagatcgcgcagaatcaggcgcacagctgcagcgacgcgagc
ggcgcgaggctgtggatgcacaataatttcctcgtcgatcgctcgggcaagatgtcgaag
tcgagcggcgagttcctgcgcgtgcagctcctgatcgacaagggctaccaccccctcgcc
tatcgcctgatgtgcctgcaggctcattatcgcagcgagctcgaattttcgtgggaaggc
ctcggcgccgcgctgacgcgattgaagcggctggtgatggcggcggcaccggttcgcgat
gcggagcctgccgaacccgccgaccgccgcctcgccgaactgctcgccaggttcgacacg
gcgatgtccgacgacctcaacacgcccgtcgcgctgaccctgctcgaagaagcggcggcg
atgaaaaagatcgacgggggccagaagcgcgcgacgctcgccgcgatggacgcggtgctc
ggcctcgacctgctgacgatcgaccgcgccgacttgcgcgtccggcccaaggcggcgact
atcgccgaagacgaaatcgaagcgatcctcgcgcgccgcaaagaagcccgcgccgccaaa
gacttcgccgcgtccgacgcgctccgcgacgagctcggcgcagcgggagtcgaggtaatg
gacggcgatccgctcggctgggagtggcggctcgacaactag
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