Uncultured Sphingopyxis sp. UC10: SPPYR_2757
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Entry
SPPYR_2757 CDS
T05531
Symbol
sucD
Name
(GenBank) succinyl-CoA synthetase, NAD(P)-binding, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00020
Citrate cycle (TCA cycle)
sphu00640
Propanoate metabolism
sphu00660
C5-Branched dibasic acid metabolism
sphu00720
Other carbon fixation pathways
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01120
Microbial metabolism in diverse environments
sphu01200
Carbon metabolism
Module
sphu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPPYR_2757 (sucD)
00640 Propanoate metabolism
SPPYR_2757 (sucD)
00660 C5-Branched dibasic acid metabolism
SPPYR_2757 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
SPPYR_2757 (sucD)
Enzymes [BR:
sphu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
SPPYR_2757 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
SBV33877
UniProt:
A0A1Y5Q274
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All DBs
Position
SPPYR:complement(2907651..2908628)
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AA seq
325 aa
AA seq
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MSILIDKNTKVITQGMTGATGTFHTEQALAYGTQMVGGVTPGKGGTTHIGLPMFNTVEEA
KHATGATASVIYVPPPFAADSILEAIDAEIELIVAITEGIPVLDMVKVKRALSGSKSRLI
GPNCPGVLTPDECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNVGLGQTTAVGIGG
DPVNGTNFIDVLELFLADDATKSIIMIGEIGGPDEVNAAQWAVDPAMKPTTGFFMIGEIG
GDAEEQAAQFLIDEAKRGRKKPMAGFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAME
AAGIKVSASPSELGTTLAEVLKERV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctcatcgacaagaataccaaggtcatcacgcaagggatgaccggcgccacc
ggcaccttccacaccgaacaggcgctcgcctatggcacgcagatggtcggcggcgtgacg
ccgggcaagggcggcacgacgcatatcggcctgccgatgttcaacaccgtcgaggaagcg
aaacatgcgaccggcgcgaccgcgtcggtcatctatgtgccgccgccgttcgccgccgat
tcgatcctcgaggcgatcgatgccgagatcgagctgatcgtcgcgatcaccgagggcatt
ccggtgctcgacatggtcaaggtgaagcgcgcgctctcgggctcgaagtcgcgcctgatc
ggcccgaactgccccggcgtgctgacccccgacgaatgcaagatcggcatcatgcccggc
aacatcttcaagaagggcagcgtcggcgtcgtctcgcgctcgggcacgctgacttatgaa
gccgtgttccagacctcgaacgtcggcctcggccagaccaccgcggtcggcatcggcggc
gacccggttaacggcaccaacttcatcgacgtgctcgaactcttcctcgccgacgacgcc
accaagtcgatcatcatgatcggcgaaatcggcggccccgacgaagtcaacgccgcgcag
tgggccgtagacccggcgatgaagccgaccacgggtttcttcatgatcggcgaaatcggc
ggcgacgccgaagaacaggccgcgcagttcctgatcgacgaagcgaagcgcggccgcaag
aagccgatggccggcttcatcgcgggccgcacggcgcctccgggccgccgcatgggacat
gcaggggcaatcgtgtcgggcggcaagggcgacgccgaaagcaagatcgcggcgatggaa
gccgccggcatcaaggtgtcggcgagcccgtcggaactcggcacgacgctcgccgaagtg
ctcaaggaacgcgtctga
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