Uncultured Sphingopyxis sp. UC10: SPPYR_2762
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Entry
SPPYR_2762 CDS
T05531
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, FeS subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00020
Citrate cycle (TCA cycle)
sphu00190
Oxidative phosphorylation
sphu00650
Butanoate metabolism
sphu00720
Other carbon fixation pathways
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01120
Microbial metabolism in diverse environments
sphu01200
Carbon metabolism
Module
sphu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphu_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPPYR_2762 (sdhB)
00650 Butanoate metabolism
SPPYR_2762 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
SPPYR_2762 (sdhB)
00720 Other carbon fixation pathways
SPPYR_2762 (sdhB)
Enzymes [BR:
sphu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SPPYR_2762 (sdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer2
RickCE_cat
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
SBV33882
UniProt:
A0A1Y5PV36
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All DBs
Position
SPPYR:complement(2912700..2913482)
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AA seq
260 aa
AA seq
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MAQFVLPKNSRPQKTGTVHKAEGATAVRKFKVYRYDPDKGQNPHFDTFEIDTEKCGPMVL
DALIKMKSEQDSTLTFRRSCREGICGSCSMNMNGKNGLACTTAIEDLKGDITITPLPSMD
VIKDLVPDFTHFYAQYASIEPWLKTKTTTPSGKERLQSPEEREKLDGLYECILCACCSTS
CPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANACPK
GLSPARAIAEIKKLEAERQV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcccaattcgtcctgcccaagaacagccgcccgcaaaagacgggcacggtccacaag
gccgagggcgcgaccgccgtcaggaaattcaaggtctatcgctacgaccccgacaagggg
cagaacccgcatttcgacacgttcgagatcgacaccgaaaaatgcggcccgatggtgctc
gacgcgctgatcaagatgaagagcgagcaggattcgacgctgaccttccgccgctcgtgc
cgtgagggcatctgcggcagctgttcgatgaacatgaacggcaagaacggcctcgcctgc
acgaccgcgatcgaggatctgaagggcgacatcacgatcaccccgctgccgtcgatggac
gtcatcaaggacctcgtccccgacttcacccatttctatgcgcaatatgcgtcgatcgag
ccctggctcaagaccaagacgacgacgccgagcggcaaggagcggctccagtcgcccgag
gaacgcgaaaagctcgacgggctttacgagtgcatcctctgcgcctgctgctcgacgagc
tgcccgagctattggtggaacagcgacaagttcctcggtcccgcgatcctgcttcaggct
tatcgctggctcgccgacagtcgcgacgagatgaccggcgaacgcctcgacgaactcgaa
gatccgttccgcctctatcgctgtcacacgatcatgaactgcgccaatgcgtgccccaag
ggcctgagtccagcgcgcgcgattgccgagatcaagaagctcgaggccgagcggcaggtg
tga
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